ENSDARG00000105366


Danio rerio

Features
Gene ID: ENSDARG00000105366
  
Biological name :hist1h2a10
  
Synonyms : hist1h2a10 / histone cluster 1 H2A family member 10
  
Possible biological names infered from orthology : H2AFX / H2A histone family member X / Histone H2AX / P16104 / P27661
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 6441160
Gene end: 6441865
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142617
NCBI entrez gene - 100332885     See in Manteia.
NCBI entrez gene - 565202     See in Manteia.
swissprot - E7F5W3
ZFIN ID - ZDB-GENE-131127-92
Ensembl - ENSDARG00000105366
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026449Gallus gallus
 ENSGALG00000045705Gallus gallus
 H2AFXENSG00000188486Homo sapiens
 H2afxENSMUSG00000049932Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hist1h2a10 / histone cluster 1 H2A family member 10 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG00000112840100
hist1h2a4 / histone cluster 1 H2A family member 4 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000010531499
hist1h2a4 / histone cluster 1 H2A family member 4 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000005173699
hist1h2a5 / histone cluster 1 H2A family member 5 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000011413399
hist1h2a4 / histone cluster 1 H2A family member 4 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000009912399
hist1h2a4 / histone cluster 1 H2A family member 4 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000010301599
hist1h2a4 / histone cluster 1 H2A family member 4 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000011339999
hist1h2a4 / histone cluster 1 H2A family member 4 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000010540099
hist1h2a2 / histone cluster 1 H2A family member 2 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000011080998
CU302436.3 / H2AFX* / P27661* / P16104* / Histone H2AX * / H2A histone family member X*ENSDARG0000011380098
si:ch211-113a14.19 / H2AFX* / P27661* / P16104* / Histone H2AX * / H2A histone family member X*ENSDARG0000011348198
hist1h2a2 / histone cluster 1 H2A family member 2 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000011259398
FP236812.4 / H2AFX* / P16104* / H2A histone family member X*ENSDARG0000011587598
CU457819.1 / H2AFX* / P27661* / P16104* / Histone H2AX * / H2A histone family member X*ENSDARG0000010027998
hist1h2a1 / histone cluster 1 H2A family member1 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000010945898
hist1h2a3 / hist1h2a2 / histone cluster 1 H2A family member 3 / H2AFX* / P27661* / P16104* / Histone H2AX * / H2A histone family member X*ENSDARG0000007028098
hist1h2a2 / histone cluster 1 H2A family member 2 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000010975598
hist1h2a2 / histone cluster 1 H2A family member 2 / H2AFX* / P16104* / P27661* / Histone H2AX * / H2A histone family member X*ENSDARG0000011164898
FP340257.1 / H2AFX* / P27661* / P16104* / Histone H2AX * / H2A histone family member X*ENSDARG0000010002498
CR354435.3 / H2AFX* / P27661* / P16104* / Histone H2AX * / H2A histone family member X*ENSDARG0000011153698


Protein motifs (from Interpro)
Interpro ID Name
 IPR002119  Histone H2A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold
 IPR032454  Histone H2A, C-terminal domain
 IPR032458  Histone H2A conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006342 chromatin silencing IBA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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