ENSG00000001497


Homo sapiens

Features
Gene ID: ENSG00000001497
  
Biological name :LAS1L
  
Synonyms : LAS1L / LAS1 like, ribosome biogenesis factor / Q9Y4W2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q12
Gene start: 65512582
Gene end: 65534775
  
Corresponding Affymetrix probe sets: 208117_s_at (Human Genome U133 Plus 2.0 Array)   235541_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473630
Ensembl peptide - ENSP00000363937
Ensembl peptide - ENSP00000363940
Ensembl peptide - ENSP00000363944
Ensembl peptide - ENSP00000473471
NCBI entrez gene - 81887     See in Manteia.
OMIM - 300964
RefSeq - XM_017029880
RefSeq - NM_001170649
RefSeq - NM_001170650
RefSeq - NM_031206
RefSeq - XM_011531045
RefSeq - XM_011531046
RefSeq - XM_017029877
RefSeq - XM_017029878
RefSeq - XM_017029879
RefSeq - XM_005262301
RefSeq - XM_005262304
RefSeq - XM_005262305
RefSeq - XM_005262306
RefSeq Peptide - NP_001164121
RefSeq Peptide - NP_112483
RefSeq Peptide - NP_001164120
swissprot - Q9Y4W2
swissprot - R4GNF7
Ensembl - ENSG00000001497
  
Related genetic diseases (OMIM): 309585 - Wilson-Turner syndrome, 309585
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 las1lENSDARG00000062457Danio rerio
 LAS1LENSGALG00000043447Gallus gallus
 Las1lENSMUSG00000057421Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007174  Las1-like
 IPR036936  CRIB domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000460 maturation of 5.8S rRNA IBA
 biological_processGO:0000470 maturation of LSU-rRNA IBA
 biological_processGO:0000478 endonucleolytic cleavage involved in rRNA processing IBA
 biological_processGO:0006325 chromatin organization IBA
 biological_processGO:0006364 rRNA processing TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 cellular_componentGO:0071339 MLL1 complex IDA
 molecular_functionGO:0003723 RNA binding HDA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000219 Thin upper lip 
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000336 Prominent supraorbital ridges "Abnormal prominence of the supraorbital ridges, which are bony ridge located above the eye sockets in the area of the eyebrows." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000455 Broad nasal tip 
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 HP:0000490 Deep set eyes 
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 HP:0000574 Thick eyebrows 
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 HP:0000692 Misalignment of teeth 
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 HP:0000712 Emotional lability 
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 HP:0000750 Impaired language development 
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 HP:0000771 Gynecomastia 
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 HP:0000823 Delayed puberty 
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 HP:0001182 Tapered fingers 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001328 Learning disability 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001423 X-linked dominant inheritance "A mode of inheritance that is observed for dominant traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked dominant disorders tend to manifest very severely in affected males. The severity of manifestation in females may depend on the degree of skewed X inactivation." [HPO:curators]
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001956 Truncal obesity "Obesity located preferentially in the trunk of the body as opposed to the extremities." [HPO:curators]
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 HP:0001999 Facial dysmorphism 
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 HP:0002465 Poor speech 
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 HP:0002808 Kyphosis 
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 HP:0003199 Decreased muscle mass 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0008551 Underdeveloped ears 
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 HP:0008734 Decreased testicular size 
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 HP:0010620 Prominent malar region "Increased prominence of the malar region (cheeks)." [HPO:curators]
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 HP:0200055 Small hands 
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 HP:0400005 Short ear "Median longitudinal ear length less than two SD above the mean determined by the maximal distance from the superior aspect to the inferior aspect of the external ear." [eom:2cff5ac9b681fc73, pmid:19152421]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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