ENSG00000011376


Homo sapiens

Features
Gene ID: ENSG00000011376
  
Biological name :LARS2
  
Synonyms : LARS2 / leucyl-tRNA synthetase 2, mitochondrial / Q15031
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.31
Gene start: 45388506
Gene end: 45549421
  
Corresponding Affymetrix probe sets: 204016_at (Human Genome U133 Plus 2.0 Array)   34764_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000412893
Ensembl peptide - ENSP00000495707
Ensembl peptide - ENSP00000495093
Ensembl peptide - ENSP00000494606
Ensembl peptide - ENSP00000265537
Ensembl peptide - ENSP00000401388
Ensembl peptide - ENSP00000408576
NCBI entrez gene - 23395     See in Manteia.
OMIM - 604544
RefSeq - XM_005265006
RefSeq - XM_017006042
RefSeq - NM_015340
RefSeq - XM_011533554
RefSeq Peptide - NP_056155
swissprot - Q15031
swissprot - E9PHM2
swissprot - C9JYR8
Ensembl - ENSG00000011376
  
Related genetic diseases (OMIM): 615300 - Perrault syndrome 4, 615300
  617021 - ?Hydrops, lactic acidosis, and sideroblastic anemia, 617021
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lars2ENSDARG00000075337Danio rerio
 LARS2ENSGALG00000036309Gallus gallus
 Lars2ENSMUSG00000035202Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR002300  Aminoacyl-tRNA synthetase, class Ia
 IPR002302  Leucine-tRNA ligase
 IPR009008  Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
 IPR009080  Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
 IPR013155  Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006429 leucyl-tRNA aminoacylation IEA
 biological_processGO:0032543 mitochondrial translation IBA
 biological_processGO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity IEA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0002161 aminoacyl-tRNA editing activity IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004823 leucine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000013 Hypoplastic uterus 
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 HP:0000130 Abnormality of the uterus "An abnormality of the uterus (womb)." [HPO:curators]
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 HP:0000786 Primary amenorrhea 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001410 Decreased liver function 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001562 Oligohydramnios 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001730 Progressive hearing loss 
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 HP:0001873 Thrombocytopenia 
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 HP:0001924 Sideroblastic anemia 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003577 Onset at birth 
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 HP:0008209 Premature ovarian failure 
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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