ENSG00000026297


Homo sapiens

Features
Gene ID: ENSG00000026297
  
Biological name :RNASET2
  
Synonyms : O00584 / ribonuclease T2 / RNASET2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q27
Gene start: 166929504
Gene end: 166957191
  
Corresponding Affymetrix probe sets: 1556201_at (Human Genome U133 Plus 2.0 Array)   1568977_at (Human Genome U133 Plus 2.0 Array)   217983_s_at (Human Genome U133 Plus 2.0 Array)   217984_at (Human Genome U133 Plus 2.0 Array)   232722_at (Human Genome U133 Plus 2.0 Array)   239388_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422846
Ensembl peptide - ENSP00000424947
Ensembl peptide - ENSP00000482755
Ensembl peptide - ENSP00000480244
Ensembl peptide - ENSP00000426455
Ensembl peptide - ENSP00000426059
Ensembl peptide - ENSP00000028008
Ensembl peptide - ENSP00000390833
NCBI entrez gene - 8635     See in Manteia.
OMIM - 612944
RefSeq - XM_017011399
RefSeq - NM_003730
RefSeq - XM_017011397
RefSeq - XM_017011398
RefSeq Peptide - NP_003721
swissprot - D6RHI9
swissprot - J3QQ64
swissprot - D6REQ6
swissprot - A0A087WZM2
swissprot - A0A087WWI1
swissprot - O00584
Ensembl - ENSG00000026297
  
Related genetic diseases (OMIM): 612951 - Leukoencephalopathy, cystic, without megalencephaly, 612951
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B8XY56ENSDARG00000036282Danio rerio
 RNASET2ENSGALG00000011426Gallus gallus
 C0HKG5ENSMUSG00000095687Mus musculus
 C0HKG5ENSMUSG00000094724Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AL159163.1ENSG0000024914159


Protein motifs (from Interpro)
Interpro ID Name
 IPR001568  Ribonuclease T2-like
 IPR018188  Ribonuclease T2, His active site 1
 IPR033130  Ribonuclease T2, His active site 2
 IPR033697  Ribonuclease T2, eukaryotic
 IPR036430  Ribonuclease T2-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006401 RNA catabolic process TAS
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen IEA
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0043202 lysosomal lumen IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004540 ribonuclease activity TAS
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0033897 ribonuclease T2 activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000295 Doll-like facies 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000750 Impaired language development 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002305 Athetosis "Athetosis (from the Greek word for changeable or unfixed ) refers to an inability to sustain the muscles of the fingers, toes, tongue, or any other group of muscles in a fixed position. Instead, posture is interrupted by slow, purposeless involuntary movements." [HPO:curators]
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 HP:0002352 Leukoencephalopathy 
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 HP:0002465 Poor speech 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003677 Slow progression 
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 HP:0007042 Focal white matter lesions 
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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 HP:0011400 Abnormal CNS myelination "An abnormality of `myelination` (GO:0042552) of nerves in the central nervous system." [DDD:fmuntoni]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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