ENSG00000029639


Homo sapiens

Features
Gene ID: ENSG00000029639
  
Biological name :TFB1M
  
Synonyms : Q8WVM0 / TFB1M / transcription factor B1, mitochondrial
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q25.3
Gene start: 155257509
Gene end: 155314493
  
Corresponding Affymetrix probe sets: 219169_s_at (Human Genome U133 Plus 2.0 Array)   228075_x_at (Human Genome U133 Plus 2.0 Array)   234301_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000356134
NCBI entrez gene - 51106     See in Manteia.
OMIM - 607033
RefSeq - XM_017010917
RefSeq - NM_016020
RefSeq - XM_011535871
RefSeq - XM_011535872
RefSeq - XM_011535873
RefSeq - XM_005267006
RefSeq - XM_011535870
RefSeq Peptide - NP_057104
swissprot - Q8WVM0
swissprot - E5KTM5
Ensembl - ENSG00000029639
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfb1mENSDARG00000040727Danio rerio
 TFB1MENSGALG00000013647Gallus gallus
 Tfb1mENSMUSG00000036983Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DIMT1 / Q9UNQ2 / DIM1 dimethyladenosine transferase 1 homologENSG0000008618921


Protein motifs (from Interpro)
Interpro ID Name
 IPR001737  Ribosomal RNA adenine methyltransferase KsgA/Erm
 IPR011530  Ribosomal RNA adenine dimethylase
 IPR020596  Ribosomal RNA adenine methylase transferase, conserved site
 IPR020598  Ribosomal RNA adenine methylase transferase, N-terminal
 IPR023165  rRNA adenine dimethylase-like
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0007005 mitochondrion organization TAS
 biological_processGO:0031167 rRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0042645 mitochondrial nucleoid IDA
 molecular_functionGO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity EXP
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008649 rRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis
rRNA modification in the mitochondrion


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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