ENSG00000033030


Homo sapiens

Features
Gene ID: ENSG00000033030
  
Biological name :ZCCHC8
  
Synonyms : Q6NZY4 / ZCCHC8 / zinc finger CCHC-type containing 8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q24.31
Gene start: 122471600
Gene end: 122501073
  
Corresponding Affymetrix probe sets: 218478_s_at (Human Genome U133 Plus 2.0 Array)   230786_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000488055
Ensembl peptide - ENSP00000441112
Ensembl peptide - ENSP00000441423
Ensembl peptide - ENSP00000437578
Ensembl peptide - ENSP00000438993
Ensembl peptide - ENSP00000440234
NCBI entrez gene - 55596     See in Manteia.
OMIM - 616381
RefSeq - XM_017019606
RefSeq - NM_017612
RefSeq - XM_006719491
RefSeq - XM_011538555
RefSeq Peptide - NP_060082
swissprot - Q6NZY4
swissprot - F5GYI9
swissprot - F5H6J5
swissprot - F5GX80
Ensembl - ENSG00000033030
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zcchc8ENSDARG00000034982Danio rerio
 ZCCHC8ENSGALG00000004486Gallus gallus
 Q9CYA6ENSMUSG00000029427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR006568  PSP, proline-rich
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IC
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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