ENSMUSG00000029427


Mus musculus

Features
Gene ID: ENSMUSG00000029427
  
Biological name :Zcchc8
  
Synonyms : Q9CYA6 / Zcchc8 / zinc finger, CCHC domain containing 8
  
Possible biological names infered from orthology : Q6NZY4 / zinc finger CCHC-type containing 8
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 123698294
Gene end: 123721100
  
Corresponding Affymetrix probe sets: 10533687 (MoGene1.0st)   1423755_at (Mouse Genome 430 2.0 Array)   1441639_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142363
Ensembl peptide - ENSMUSP00000143781
Ensembl peptide - ENSMUSP00000143723
Ensembl peptide - ENSMUSP00000143139
Ensembl peptide - ENSMUSP00000142531
Ensembl peptide - ENSMUSP00000142383
Ensembl peptide - ENSMUSP00000031376
NCBI entrez gene - 70650     See in Manteia.
MGI - MGI:1917900
RefSeq - XM_006530457
RefSeq - NM_027494
RefSeq Peptide - NP_081770
swissprot - A0A0G2JDI6
swissprot - A0A0G2JGW3
swissprot - A0A0G2JDW3
swissprot - Q9CYA6
swissprot - A0A0G2JFE4
swissprot - A0A0G2JH09
Ensembl - ENSMUSG00000029427
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zcchc8ENSDARG00000034982Danio rerio
 ZCCHC8ENSGALG00000004486Gallus gallus
 Q6NZY4ENSG00000033030Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR006568  PSP, proline-rich
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0016604 nuclear body ISO
 cellular_componentGO:0071013 catalytic step 2 spliceosome ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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