ENSG00000049883


Homo sapiens

Features
Gene ID: ENSG00000049883
  
Biological name :PTCD2
  
Synonyms : pentatricopeptide repeat domain 2 / PTCD2 / Q8WV60
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q13.2
Gene start: 72320367
Gene end: 72368395
  
Corresponding Affymetrix probe sets: 1555910_at (Human Genome U133 Plus 2.0 Array)   219658_at (Human Genome U133 Plus 2.0 Array)   236903_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000425606
Ensembl peptide - ENSP00000425773
Ensembl peptide - ENSP00000444772
Ensembl peptide - ENSP00000438810
Ensembl peptide - ENSP00000429665
Ensembl peptide - ENSP00000427524
Ensembl peptide - ENSP00000427349
Ensembl peptide - ENSP00000426295
Ensembl peptide - ENSP00000308948
Ensembl peptide - ENSP00000370013
NCBI entrez gene - 79810     See in Manteia.
OMIM - 615484
RefSeq - XM_017009868
RefSeq - NM_001284403
RefSeq - NM_001284404
RefSeq - NM_001284405
RefSeq - NM_024754
RefSeq - XM_005248601
RefSeq - XM_005248603
RefSeq - XM_017009866
RefSeq - XM_017009867
RefSeq Peptide - NP_001271332
RefSeq Peptide - NP_001271333
RefSeq Peptide - NP_001271334
RefSeq Peptide - NP_079030
swissprot - Q8WV60
swissprot - B7Z8R2
swissprot - A0A024RAM6
swissprot - F6S289
swissprot - D6RGK0
swissprot - E5RHU2
swissprot - D6RJH8
swissprot - D6RIZ0
Ensembl - ENSG00000049883
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptcd2ENSDARG00000035391Danio rerio
 PTCD2ENSGALG00000038260Gallus gallus
 Ptcd2ENSMUSG00000021650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002885  Pentatricopeptide repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR034629  Pentatricopeptide repeat-containing protein 2, mitochondrial
 IPR034913  MRPS27/PTCD2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0001889 liver development IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0048747 muscle fiber development IEA
 biological_processGO:0050684 regulation of mRNA processing IEA
 biological_processGO:0055010 ventricular cardiac muscle tissue morphogenesis IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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