ENSG00000052802


Homo sapiens

Features
Gene ID: ENSG00000052802
  
Biological name :MSMO1
  
Synonyms : methylsterol monooxygenase 1 / MSMO1 / Q15800
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q32.3
Gene start: 165327623
Gene end: 165343160
  
Corresponding Affymetrix probe sets: 209146_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000377361
Ensembl peptide - ENSP00000425241
Ensembl peptide - ENSP00000425112
Ensembl peptide - ENSP00000423633
Ensembl peptide - ENSP00000261507
NCBI entrez gene - 6307     See in Manteia.
OMIM - 607545
RefSeq - XM_005263176
RefSeq - NM_001017369
RefSeq - NM_006745
RefSeq Peptide - NP_001017369
RefSeq Peptide - NP_006736
swissprot - Q15800
swissprot - D6REA2
swissprot - D6RDP9
swissprot - D6R952
Ensembl - ENSG00000052802
  
Related genetic diseases (OMIM): 616834 - Microcephaly, congenital cataract, and psoriasiform dermatitis, 616834
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msmo1ENSDARG00000055876Danio rerio
 MSMO1ENSGALG00000009560Gallus gallus
 Msmo1ENSMUSG00000031604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CH25H / O95992 / cholesterol 25-hydroxylaseENSG0000013813522
FAXDC2 / Q96IV6 / fatty acid hydroxylase domain containing 2ENSG0000017027118


Protein motifs (from Interpro)
Interpro ID Name
 IPR006694  Fatty acid hydroxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process TAS
 biological_processGO:0006694 steroid biosynthetic process IEA
 biological_processGO:0006695 cholesterol biosynthetic process TAS
 biological_processGO:0008202 steroid metabolic process TAS
 biological_processGO:0008610 lipid biosynthetic process IEA
 biological_processGO:0016126 sterol biosynthetic process IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum TAS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000254 C-4 methylsterol oxidase activity TAS
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000498 Blepharitis "Inflammation of the eyelids." [HPO:curators]
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 HP:0000519 Congenital cataract "A congenital `cataract` (HP:0000518)." [HPO:probinson]
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 HP:0000823 Delayed puberty 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002829 Arthralgia 
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 HP:0003146 Hypocholesterolemia 
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 HP:0003563 Hypobetalipoproteinemia 
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 HP:0003765 Psoriasis 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0008064 Ichthyosiform abnormality of the skin 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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