ENSDARG00000055876


Danio rerio

Features
Gene ID: ENSDARG00000055876
  
Biological name :msmo1
  
Synonyms : methylsterol monooxygenase 1 / msmo1
  
Possible biological names infered from orthology : Q15800 / Q9CRA4
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 20916551
Gene end: 20928772
  
Corresponding Affymetrix probe sets: Dr.12110.1.S1_at (Zebrafish Array)   NM_213353_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000072739
NCBI entrez gene - 406662     See in Manteia.
RefSeq - NM_213353
RefSeq Peptide - NP_998518
swissprot - F1QFS0
ZFIN ID - ZDB-GENE-040426-2670
Ensembl - ENSDARG00000055876
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MSMO1ENSGALG00000009560Gallus gallus
 MSMO1ENSG00000052802Homo sapiens
 Msmo1ENSMUSG00000031604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
faxdc2 / fatty acid hydroxylase domain containing 2 / Q96IV6*ENSDARG0000002382021
ch25h / Q5PRC0 / cholesterol 25-hydroxylaseENSDARG0000004519021
Q567X1 / ch25hl1.1 / cholesterol 25-hydroxylase like 1, tandem duplicate 1ENSDARG0000003938119
Q1LX59 / ch25hl1.2 / cholesterol 25-hydroxylase like 1, tandem duplicate 2ENSDARG0000006813818
A8WGT1 / ch25hl2 / cholesterol 25-hydroxylase like 2ENSDARG0000003872818
CR762390.1 / CH25H* / O95992* / cholesterol 25-hydroxylase*ENSDARG0000009381817


Protein motifs (from Interpro)
Interpro ID Name
 IPR006694  Fatty acid hydroxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008610 lipid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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