ENSDARG00000039381


Danio rerio

Features
Gene ID: ENSDARG00000039381
  
Biological name :ch25hl1.1
  
Synonyms : ch25hl1.1 / cholesterol 25-hydroxylase like 1, tandem duplicate 1 / Q567X1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 26853891
Gene end: 26854959
  
Corresponding Affymetrix probe sets: Dr.12805.1.S1_at (Zebrafish Array)   NM_001017865_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000057552
NCBI entrez gene - 336673     See in Manteia.
RefSeq - NM_001017865
RefSeq Peptide - NP_001017865
swissprot - A0A223M0K3
swissprot - Q567X1
ZFIN ID - ZDB-GENE-030131-8617
Ensembl - ENSDARG00000039381
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q1LX59 / ch25hl1.2 / cholesterol 25-hydroxylase like 1, tandem duplicate 2ENSDARG0000006813846
A8WGT1 / ch25hl2 / cholesterol 25-hydroxylase like 2ENSDARG0000003872843
ch25h / Q5PRC0 / cholesterol 25-hydroxylaseENSDARG0000004519037
CR762390.1 / CH25H* / O95992* / cholesterol 25-hydroxylase*ENSDARG0000009381832
msmo1 / methylsterol monooxygenase 1 / Q15800* / Q9CRA4*ENSDARG0000005587620
faxdc2 / fatty acid hydroxylase domain containing 2 / Q96IV6*ENSDARG0000002382016


Protein motifs (from Interpro)
Interpro ID Name
 IPR006694  Fatty acid hydroxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006694 steroid biosynthetic process IEA
 biological_processGO:0008202 steroid metabolic process IEA
 biological_processGO:0008203 cholesterol metabolic process IBA
 biological_processGO:0008610 lipid biosynthetic process IEA
 biological_processGO:0016126 sterol biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008395 steroid hydroxylase activity IBA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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