ENSDARG00000023820


Danio rerio

Features
Gene ID: ENSDARG00000023820
  
Biological name :faxdc2
  
Synonyms : fatty acid hydroxylase domain containing 2 / faxdc2
  
Possible biological names infered from orthology : Gm12248 / Q96IV6
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 45839917
Gene end: 45852112
  
Corresponding Affymetrix probe sets: Dr.8390.1.S1_at (Zebrafish Array)   NM_213507_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000035841
Ensembl peptide - ENSDARP00000154694
NCBI entrez gene - 406828     See in Manteia.
RefSeq - NM_213507
RefSeq Peptide - NP_998672
swissprot - Q803P4
ZFIN ID - ZDB-GENE-040426-2907
Ensembl - ENSDARG00000023820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAXDC2ENSGALG00000003972Gallus gallus
 FAXDC2ENSG00000170271Homo sapiens
 Gm12248ENSMUSG00000086962Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
msmo1 / methylsterol monooxygenase 1 / Q15800* / Q9CRA4*ENSDARG0000005587619
ch25h / Q5PRC0 / cholesterol 25-hydroxylaseENSDARG0000004519015
Q1LX59 / ch25hl1.2 / cholesterol 25-hydroxylase like 1, tandem duplicate 2ENSDARG0000006813814
Q567X1 / ch25hl1.1 / cholesterol 25-hydroxylase like 1, tandem duplicate 1ENSDARG0000003938113
A8WGT1 / ch25hl2 / cholesterol 25-hydroxylase like 2ENSDARG0000003872813
CR762390.1 / CH25H* / O95992* / cholesterol 25-hydroxylase*ENSDARG0000009381811


Protein motifs (from Interpro)
Interpro ID Name
 IPR006694  Fatty acid hydroxylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IBA
 biological_processGO:0008610 lipid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr