ENSG00000058673


Homo sapiens

Features
Gene ID: ENSG00000058673
  
Biological name :ZC3H11A
  
Synonyms : O75152 / ZC3H11A / zinc finger CCCH-type containing 11A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q32.1
Gene start: 203795654
Gene end: 203854999
  
Corresponding Affymetrix probe sets: 1565867_a_at (Human Genome U133 Plus 2.0 Array)   205787_x_at (Human Genome U133 Plus 2.0 Array)   205788_s_at (Human Genome U133 Plus 2.0 Array)   243648_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000406531
Ensembl peptide - ENSP00000356183
Ensembl peptide - ENSP00000415072
Ensembl peptide - ENSP00000491830
Ensembl peptide - ENSP00000491483
Ensembl peptide - ENSP00000432602
Ensembl peptide - ENSP00000333253
Ensembl peptide - ENSP00000356179
Ensembl peptide - ENSP00000356181
NCBI entrez gene - 9877     See in Manteia.
OMIM - 613513
RefSeq - XM_017002964
RefSeq - XM_011510199
RefSeq - XM_011510200
RefSeq - XM_011510201
RefSeq - XM_011510202
RefSeq - XM_017002956
RefSeq - XM_017002957
RefSeq - XM_017002958
RefSeq - XM_017002959
RefSeq - XM_017002960
RefSeq - XM_017002961
RefSeq - XM_017002962
RefSeq - XM_017002963
RefSeq - NM_001319238
RefSeq - NM_001319239
RefSeq - NM_014827
RefSeq - XM_005245643
RefSeq - XM_005245644
RefSeq - XM_006711673
RefSeq Peptide - NP_001337193
RefSeq Peptide - NP_001306167
RefSeq Peptide - NP_001306168
RefSeq Peptide - NP_001337190
RefSeq Peptide - NP_001337191
RefSeq Peptide - NP_001337192
RefSeq Peptide - NP_055642
swissprot - E9PBY7
swissprot - C9J0L0
swissprot - E9PQ61
swissprot - O75152
swissprot - A0A1W2PPR9
Ensembl - ENSG00000058673
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zc3h11aENSDARG00000009754Danio rerio
 ENSGALG00000045178Gallus gallus
 ENSGALG00000045415Gallus gallus
 ZC3H11AENSGALG00000000541Gallus gallus
 Q6NZF1ENSMUSG00000116275Mus musculus
 Q6NZF1ENSMUSG00000102976Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZC3H11B / zinc finger CCCH-type containing 11BENSG0000021581792
Q8NA57 / C12orf50 / chromosome 12 open reading frame 50ENSG0000016580512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IMP
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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