ENSMUSG00000116275


Mus musculus

Features
Gene ID: ENSMUSG00000116275
  
Biological name :Zc3h11a
  
Synonyms : Q6NZF1 / Zc3h11a / Zinc finger CCCH domain-containing protein 11A
  
Possible biological names infered from orthology : O75152 / ZC3H11B / zinc finger CCCH-type containing 11A / zinc finger CCCH-type containing 11B
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: E4
Gene start: 133619871
Gene end: 133661380
  
Corresponding Affymetrix probe sets: 10357814 (MoGene1.0st)   10341608 (MoGene1.0st)   10343027 (MoGene1.0st)   1415764_at (Mouse Genome 430 2.0 Array)   1426359_at (Mouse Genome 430 2.0 Array)   1426360_at (Mouse Genome 430 2.0 Array)   1426361_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000027736
NCBI entrez gene - 70579     See in Manteia.
MGI - MGI:1917829
RefSeq - XM_011248076
RefSeq - NM_144530
RefSeq - XM_011248074
RefSeq Peptide - NP_001344157
RefSeq Peptide - NP_653113
swissprot - Q3UL31
swissprot - Q6NZF1
Ensembl - ENSMUSG00000116275
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zc3h11aENSDARG00000009754Danio rerio
 ENSGALG00000045178Gallus gallus
 ENSGALG00000045415Gallus gallus
 ZC3H11AENSGALG00000000541Gallus gallus
 O75152ENSG00000058673Homo sapiens
 ZC3H11BENSG00000215817Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6NZF1 / Zc3h11a / zinc finger CCCH type containing 11A / O75152* / ZC3H11B* / zinc finger CCCH-type containing 11B*ENSMUSG00000102976100
1700017N19Rik / RIKEN cDNA 1700017N19 gene / Q8NA57* / C12orf50* / chromosome 12 open reading frame 50*ENSMUSG0000005691211


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus ISS
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex ISS
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr