ENSMUSG00000056912


Mus musculus

Features
Gene ID: ENSMUSG00000056912
  
Biological name :1700017N19Rik
  
Synonyms : 1700017N19Rik / RIKEN cDNA 1700017N19 gene
  
Possible biological names infered from orthology : C12orf50 / chromosome 12 open reading frame 50 / Q8NA57
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: D1
Gene start: 100590484
Gene end: 100618401
  
Corresponding Affymetrix probe sets: 10366131 (MoGene1.0st)   1430140_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000042828
Ensembl peptide - ENSMUSP00000151731
Ensembl peptide - ENSMUSP00000141032
Ensembl peptide - ENSMUSP00000140726
Ensembl peptide - ENSMUSP00000140717
Ensembl peptide - ENSMUSP00000140459
Ensembl peptide - ENSMUSP00000140291
Ensembl peptide - ENSMUSP00000140022
Ensembl peptide - ENSMUSP00000139857
Ensembl peptide - ENSMUSP00000139797
NCBI entrez gene - 66605     See in Manteia.
MGI - MGI:1913855
RefSeq - NM_001081246
RefSeq - XM_006513955
RefSeq - XM_006513956
RefSeq - XM_017314058
RefSeq Peptide - NP_001074715
swissprot - A0A087WQ33
swissprot - D3YX67
swissprot - A0A087WPJ1
swissprot - A0A087WPP2
swissprot - A0A087WSG1
swissprot - A0A087WRQ1
swissprot - A0A087WRP3
swissprot - A0A087WR40
swissprot - A0A087WQP6
Ensembl - ENSMUSG00000056912
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zc3h11aENSDARG00000009754Danio rerio
 C12orf50ENSGALG00000045093Gallus gallus
 Q8NA57ENSG00000165805Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6NZF1 / Zc3h11a / Zinc finger CCCH domain-containing protein 11A / O75152* / ZC3H11B* / zinc finger CCCH-type containing 11A* / zinc finger CCCH-type containing 11B*ENSMUSG0000011627521
Q6NZF1 / Zc3h11a / zinc finger CCCH type containing 11A / O75152* / ZC3H11B* / zinc finger CCCH-type containing 11B*ENSMUSG0000010297621


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr