ENSG00000066654


Homo sapiens

Features
Gene ID: ENSG00000066654
  
Biological name :THUMPD1
  
Synonyms : Q9NXG2 / THUMPD1 / THUMP domain containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p12.3
Gene start: 20702816
Gene end: 20742084
  
Corresponding Affymetrix probe sets: 206555_s_at (Human Genome U133 Plus 2.0 Array)   213025_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000490841
Ensembl peptide - ENSP00000370741
Ensembl peptide - ENSP00000379392
Ensembl peptide - ENSP00000455033
NCBI entrez gene - 55623     See in Manteia.
OMIM - 616662
RefSeq - XM_017023433
RefSeq - NM_001304550
RefSeq - NM_017736
RefSeq - XM_011545891
RefSeq Peptide - NP_001291479
RefSeq Peptide - NP_060206
swissprot - H3BNW0
swissprot - Q9NXG2
swissprot - A0A024R388
Ensembl - ENSG00000066654
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thumpd1ENSDARG00000100264Danio rerio
 ENSGALG00000002134Gallus gallus
 Q99J36ENSMUSG00000030942Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004114  THUMP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification TAS
 biological_processGO:0006400 tRNA modification IBA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000135372 NAT10 / Q9H0A0 / N-acetyltransferase 10  / complex






 

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contact: otassy@igbmc.fr