ENSG00000068724


Homo sapiens

Features
Gene ID: ENSG00000068724
  
Biological name :TTC7A
  
Synonyms : Q9ULT0 / tetratricopeptide repeat domain 7A / TTC7A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p21
Gene start: 46916157
Gene end: 47076137
  
Corresponding Affymetrix probe sets: 224912_at (Human Genome U133 Plus 2.0 Array)   224923_at (Human Genome U133 Plus 2.0 Array)   224924_at (Human Genome U133 Plus 2.0 Array)   240369_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000401467
Ensembl peptide - ENSP00000386521
Ensembl peptide - ENSP00000393022
Ensembl peptide - ENSP00000316699
Ensembl peptide - ENSP00000378320
Ensembl peptide - ENSP00000386307
NCBI entrez gene - 57217     See in Manteia.
OMIM - 609332
RefSeq - XM_017004530
RefSeq - XM_011532998
RefSeq - XM_011532999
RefSeq - XM_011533000
RefSeq - XM_017004524
RefSeq - XM_017004525
RefSeq - XM_017004526
RefSeq - XM_017004527
RefSeq - XM_017004528
RefSeq - XM_017004529
RefSeq - NM_001288951
RefSeq - NM_001288953
RefSeq - NM_001288955
RefSeq - NM_020458
RefSeq - XM_005264439
RefSeq Peptide - NP_001275882
RefSeq Peptide - NP_001275884
RefSeq Peptide - NP_065191
RefSeq Peptide - NP_001275880
swissprot - H0Y3V7
swissprot - Q9ULT0
swissprot - H7C055
swissprot - H7C1P2
swissprot - G5E9G4
Ensembl - ENSG00000068724
  
Related genetic diseases (OMIM): 243150 - Gastrointestinal defects and immunodeficiency syndrome, 243150
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttc7aENSDARG00000074760Danio rerio
 TTC7AENSGALG00000010020Gallus gallus
 Ttc7ENSMUSG00000036918Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TTC7B / Q86TV6 / tetratricopeptide repeat domain 7BENSG0000016591447


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR026900  Tetratricopeptide repeat protein 7A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006879 cellular iron ion homeostasis IEA
 biological_processGO:0030097 hemopoiesis IEA
 biological_processGO:0072659 protein localization to plasma membrane IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000778 Thymus hypoplasia "Underdevelopment of the thymus." [HPO:curators]
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 HP:0000872 Hashimoto thyroiditis 
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 HP:0000924 Abnormality of the musculoskeletal system "An abnormality of the musculoskeletal system including one or more abnormalities affecting bones, muscles, cartilage, tendons, ligaments, joints, and other connective tissue." [HPO:curators]
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 HP:0001072 Thickened skin 
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 HP:0001438 Abnormality of the abdomen "Abnormality of the abdomen ("belly"), that is, the part of the body between the pelvis and the thorax." [HPO:curators]
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001539 Omphalocele 
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 HP:0001561 Polyhydramnios 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001890 Autoimmune hemolytic anemia 
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 HP:0002223 Absent eyebrows 
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 HP:0002293 Alopecia of scalp 
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 HP:0002566 Intestinal malrotation "An abnormality of the intestinal rotation and fixation that normally occurs during the development of the gut. This can lead to volvulus, or twisting of the intestine that causes obstruction and necrosis." [HPO:curators]
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 HP:0002573 Hematochezia 
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 HP:0002589 Gastrointestinal atresia 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0003765 Psoriasis 
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 HP:0004430 Severe combined immunodeficiency "Severe combine immunodeficiency (SCID) is a primary immune deficiency that is characterized by a severe defect in both the T- and B-lymphocyte systems." [HPO:curators]
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 HP:0005224 Rectal abscess 
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 HP:0005229 Jejunoileal ulceration 
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 HP:0008070 Sparse hair 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0010766 Ectopic calcifications 
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 HP:0010959 Congenital cystic adenomatoid malformation of the lung "A hamartomatous lesion of the lung (i.e., a lesion characterized by normal lung tissues in a disorganized spatial arrangement)." [HPO:probinson, pmid:20610189]
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 HP:0011100 Intestinal atresia "An abnormal closure, or `atresia` (PATO:0001819) of the tubular structure of the `intestine` (FMA:7199)." [HPO:probinson]
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 HP:0012115 Hepatitis "Inflammation of the liver." [HPO:probinson]
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 HP:0025085 Bloody diarrhea "Passage of many stools containing blood." []
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 HP:0100592 Peritoneal abscess "The presence of an `abscess` (MPATH:608) of the `peritoneum` (FMA:9584)." [HPO:probinson]
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 HP:0100651 Diabetes mellitus Type I 
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 HP:0100867 Duodenal stenosis "The narrowing or partial blockage of a portion of the duodenum." [HPO:sdoelken]
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 HP:0100889 Abnormality of the ductus choledochus "An abnormality of the `Common bile duct` (FMA:14667), a tube-like anatomic structure in the human gastrointestinal tract, formed by the union of the `Common hepatic duct` (FMA:14668) and the `Cystic duct` (FMA:14539) from the gall bladder." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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