ENSG00000068784


Homo sapiens

Features
Gene ID: ENSG00000068784
  
Biological name :SRBD1
  
Synonyms : Q8N5C6 / S1 RNA binding domain 1 / SRBD1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p21
Gene start: 45388680
Gene end: 45612165
  
Corresponding Affymetrix probe sets: 219055_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000263736
NCBI entrez gene - 55133     See in Manteia.
RefSeq - XM_011532946
RefSeq - NM_018079
RefSeq - XM_017004417
RefSeq Peptide - NP_060549
swissprot - Q8N5C6
Ensembl - ENSG00000068784
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-117n7.8ENSDARG00000092855Danio rerio
 srbd1ENSDARG00000079827Danio rerio
 SRBD1ENSGALG00000009990Gallus gallus
 Srbd1ENSMUSG00000024135Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003029  S1 domain
 IPR006641  YqgF/RNase H-like domain
 IPR010994  RuvA domain 2-like
 IPR012337  Ribonuclease H-like superfamily
 IPR012340  Nucleic acid-binding, OB-fold
 IPR018974  Tex-like protein, N-terminal
 IPR022967  RNA-binding domain, S1
 IPR023319  Tex-like protein, HTH domain superfamily
 IPR023323  Tex-like domain superfamily
 IPR032639  Tex protein, YqgF-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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