ENSG00000070214


Homo sapiens

Features
Gene ID: ENSG00000070214
  
Biological name :SLC44A1
  
Synonyms : Q8WWI5 / SLC44A1 / solute carrier family 44 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q31.1
Gene start: 105244622
Gene end: 105439171
  
Corresponding Affymetrix probe sets: 222364_at (Human Genome U133 Plus 2.0 Array)   224595_at (Human Genome U133 Plus 2.0 Array)   224596_at (Human Genome U133 Plus 2.0 Array)   227620_at (Human Genome U133 Plus 2.0 Array)   228485_s_at (Human Genome U133 Plus 2.0 Array)   228486_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433072
Ensembl peptide - ENSP00000363852
Ensembl peptide - ENSP00000363855
Ensembl peptide - ENSP00000363856
NCBI entrez gene - 23446     See in Manteia.
OMIM - 606105
RefSeq - XM_017014560
RefSeq - NM_001286730
RefSeq - NM_080546
RefSeq - XM_005251855
RefSeq - XM_006717027
RefSeq - XM_006717028
RefSeq - XM_006717029
RefSeq - XM_017014559
RefSeq Peptide - NP_001273659
RefSeq Peptide - NP_001317660
RefSeq Peptide - NP_536856
swissprot - Q8WWI5
swissprot - A0A024R151
Ensembl - ENSG00000070214
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc44a1aENSDARG00000015946Danio rerio
 slc44a1bENSDARG00000090982Danio rerio
 SLC44A1ENSGALG00000015439Gallus gallus
 Q6X893ENSMUSG00000028412Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N4M1 / SLC44A3 / solute carrier family 44 member 3ENSG0000014303647
Q8IWA5 / SLC44A2 / solute carrier family 44 member 2ENSG0000012935328
Q53GD3 / SLC44A4 / solute carrier family 44 member 4ENSG0000020438528
Q8NCS7 / SLC44A5 / solute carrier family 44 member 5ENSG0000013796827


Protein motifs (from Interpro)
Interpro ID Name
 IPR007603  Choline transporter-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006656 phosphatidylcholine biosynthetic process TAS
 biological_processGO:0015871 choline transport TAS
 biological_processGO:0042426 choline catabolic process TAS
 biological_processGO:0055085 transmembrane transport TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0015220 choline transmembrane transporter activity TAS


Pathways (from Reactome)
Pathway description
Synthesis of PC
Transport of bile salts and organic acids, metal ions and amine compounds
Choline catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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