ENSG00000076351


Homo sapiens

Features
Gene ID: ENSG00000076351
  
Biological name :SLC46A1
  
Synonyms : Q96NT5 / SLC46A1 / solute carrier family 46 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q11.2
Gene start: 28394756
Gene end: 28407197
  
Corresponding Affymetrix probe sets: 1552278_a_at (Human Genome U133 Plus 2.0 Array)   1552279_a_at (Human Genome U133 Plus 2.0 Array)   1558703_at (Human Genome U133 Plus 2.0 Array)   233531_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467416
Ensembl peptide - ENSP00000464190
Ensembl peptide - ENSP00000480703
Ensembl peptide - ENSP00000483652
Ensembl peptide - ENSP00000462942
Ensembl peptide - ENSP00000463339
NCBI entrez gene - 113235     See in Manteia.
OMIM - 611672
RefSeq - XM_017024110
RefSeq - NM_001242366
RefSeq - NM_080669
RefSeq - XM_005277786
RefSeq Peptide - NP_542400
RefSeq Peptide - NP_001229295
swissprot - Q96NT5
swissprot - A0A024QZ15
swissprot - A0A024QZ44
swissprot - J3KTE6
swissprot - J3QRF7
swissprot - J3QL21
swissprot - K7EPJ7
Ensembl - ENSG00000076351
  
Related genetic diseases (OMIM): 229050 - Folate malabsorption, hereditary, 229050
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc46a1ENSDARG00000026149Danio rerio
 SLC46A1ENSGALG00000003604Gallus gallus
 Q6PEM8ENSMUSG00000020829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7Z3Q1 / SLC46A3 / solute carrier family 46 member 3ENSG0000013950830
Q9BY10 / SLC46A2 / solute carrier family 46 member 2ENSG0000011945722


Protein motifs (from Interpro)
Interpro ID Name
 IPR005829  Sugar transporter, conserved site
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006879 cellular iron ion homeostasis TAS
 biological_processGO:0015884 folic acid transport IMP
 biological_processGO:0015886 heme transport IEA
 biological_processGO:0046655 folic acid metabolic process TAS
 biological_processGO:0051958 methotrexate transport IMP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098829 intestinal folate absorption IC
 biological_processGO:1902600 proton transmembrane transport IDA
 biological_processGO:1904447 folate import across plasma membrane IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0009986 cell surface HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0031526 brush border membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005542 folic acid binding IEA
 molecular_functionGO:0008517 folic acid transmembrane transporter activity TAS
 molecular_functionGO:0015078 proton transmembrane transporter activity IDA
 molecular_functionGO:0015232 heme transporter activity TAS
 molecular_functionGO:0015350 methotrexate transmembrane transporter activity IC


Pathways (from Reactome)
Pathway description
Metabolism of folate and pterines
Iron uptake and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000010 Recurrent urinary tract infections "Repeated infections of the urinary tract." [HPO:curators]
Show

 HP:0000155 Oral ulcers 
Show

 HP:0000206 Glossitis "Inflammation of the tongue." [HPO:sdoelken]
Show

 HP:0000708 Behavioural/Psychiatric Abnormality 
Show

 HP:0000737 Irritability 
Show

 HP:0000980 Pallor 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001873 Thrombocytopenia 
Show

 HP:0001875 Neutropenia 
Show

 HP:0001876 Pancytopenia 
Show

 HP:0001880 Eosinophilia "Increased count of eosinophile granulocytes in the blood." [HPO:sdoelken]
Show

 HP:0001882 Leukopenia 
Show

 HP:0001889 Megaloblastic anemia 
Show

 HP:0002014 Diarrhea 
Show

 HP:0002017 Nausea and vomiting 
Show

 HP:0002020 Gastroesophageal reflux 
Show

 HP:0002024 Malabsorption 
Show

 HP:0002039 Anorexia 
Show

 HP:0002135 Basal ganglia calcification "Calcification affecting one or more structures of the basal ganglia." [HPO:curators]
Show

 HP:0002205 Recurrent respiratory infections 
Show

 HP:0002305 Athetosis "Athetosis (from the Greek word for changeable or unfixed ) refers to an inability to sustain the muscles of the fingers, toes, tongue, or any other group of muscles in a fixed position. Instead, posture is interrupted by slow, purposeless involuntary movements." [HPO:curators]
Show

 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
Show

 HP:0002719 Recurrent infections 
Show

 HP:0002721 Immunodeficiency 
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003593 Early onset 
Show

 HP:0004313 Reduced immunoglobulin levels 
Show

 HP:0004851 folate-responsive megaloblastic anemia 
Show

 HP:0008872 Feeding problems in infancy 
Show

 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
Show

 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
Show

 HP:0100825 Cheilitis "Inflammation of the lip." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr