ENSG00000077080


Homo sapiens

Features
Gene ID: ENSG00000077080
  
Biological name :ACTL6B
  
Synonyms : actin like 6B / ACTL6B / O94805
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q22.1
Gene start: 100643097
Gene end: 100656461
  
Corresponding Affymetrix probe sets: 206013_s_at (Human Genome U133 Plus 2.0 Array)   206014_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000160382
Ensembl peptide - ENSP00000420151
NCBI entrez gene - 51412     See in Manteia.
OMIM - 612458
RefSeq - NM_016188
RefSeq Peptide - NP_057272
swissprot - C9JQT4
swissprot - O94805
Ensembl - ENSG00000077080
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 actl6bENSDARG00000034107Danio rerio
 Actl6bENSMUSG00000029712Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACTL6A / O96019 / actin like 6AENSG0000013651884


Protein motifs (from Interpro)
Interpro ID Name
 IPR004000  Actin family
 IPR004001  Actin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization NAS
 biological_processGO:0006338 chromatin remodeling IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II NAS
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0021510 spinal cord development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0016514 SWI/SNF complex IEA
 cellular_componentGO:0071565 nBAF complex IEA
 molecular_functionGO:0003713 transcription coactivator activity NAS
 molecular_functionGO:0005200 structural constituent of cytoskeleton TAS


Pathways (from Reactome)
Pathway description
RMTs methylate histone arginines
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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