ENSG00000085831


Homo sapiens

Features
Gene ID: ENSG00000085831
  
Biological name :TTC39A
  
Synonyms : Q5SRH9 / tetratricopeptide repeat domain 39A / TTC39A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p32.3
Gene start: 51287258
Gene end: 51345116
  
Corresponding Affymetrix probe sets: 210652_s_at (Human Genome U133 Plus 2.0 Array)   215562_at (Human Genome U133 Plus 2.0 Array)   217101_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000383830
Ensembl peptide - ENSP00000388995
Ensembl peptide - ENSP00000436659
Ensembl peptide - ENSP00000434483
Ensembl peptide - ENSP00000432453
Ensembl peptide - ENSP00000431228
Ensembl peptide - ENSP00000408532
Ensembl peptide - ENSP00000406144
Ensembl peptide - ENSP00000405803
Ensembl peptide - ENSP00000393952
Ensembl peptide - ENSP00000262675
Ensembl peptide - ENSP00000262676
Ensembl peptide - ENSP00000360812
Ensembl peptide - ENSP00000360815
Ensembl peptide - ENSP00000370230
NCBI entrez gene - 22996     See in Manteia.
RefSeq - XM_017000715
RefSeq - NM_001080494
RefSeq - NM_001144832
RefSeq - NM_001297662
RefSeq - NM_001297663
RefSeq - NM_001297664
RefSeq - NM_001297665
RefSeq - NM_001297666
RefSeq - NM_001297667
RefSeq - XM_005270644
RefSeq - XM_006710471
RefSeq - XM_011541048
RefSeq - XM_011541049
RefSeq - XM_011541050
RefSeq - XM_011541051
RefSeq - XM_011541052
RefSeq - XM_011541053
RefSeq - XM_011541054
RefSeq Peptide - NP_001284592
RefSeq Peptide - NP_001284593
RefSeq Peptide - NP_001284594
RefSeq Peptide - NP_001284595
RefSeq Peptide - NP_001284596
RefSeq Peptide - NP_001284591
RefSeq Peptide - NP_001138304
RefSeq Peptide - NP_001073963
swissprot - A0A0A0MSH8
swissprot - F8W961
swissprot - Q5SRH9
swissprot - U5GXS1
swissprot - A0A0A0MRQ0
swissprot - E9PQX3
swissprot - E9PQ33
swissprot - E9PHX9
swissprot - E9PAZ4
swissprot - D3DQ30
swissprot - A0A140VJY6
swissprot - A0A0A0MSW9
Ensembl - ENSG00000085831
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttc39aENSDARG00000074126Danio rerio
 TTC39AENSGALG00000010540Gallus gallus
 A2ACP1ENSMUSG00000028555Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5VTQ0 / TTC39B / tetratricopeptide repeat domain 39BENSG0000015515849
Q8N584 / TTC39C / tetratricopeptide repeat domain 39CENSG0000016823422


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019412  Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39
 IPR019734  Tetratricopeptide repeat
 IPR030416  Tetratricopeptide repeat protein 39A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr