ENSGALG00000010540


Gallus gallus

Features
Gene ID: ENSGALG00000010540
  
Biological name :TTC39A
  
Synonyms : tetratricopeptide repeat domain 39A / TTC39A
  
Possible biological names infered from orthology : A2ACP1 / Q5SRH9
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 24094980
Gene end: 24125452
  
Corresponding Affymetrix probe sets: GgaAffx.20956.1.S1_at (Chicken Array)   GgaAffx.6663.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017136
NCBI entrez gene - 424632     See in Manteia.
RefSeq - XM_004936784
RefSeq - XM_422466
swissprot - E1C8P3
Ensembl - ENSGALG00000010540
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ttc39aENSDARG00000074126Danio rerio
 Q5SRH9ENSG00000085831Homo sapiens
 A2ACP1ENSMUSG00000028555Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TTC39B / tetratricopeptide repeat domain 39B / Q5VTQ0* / Q8BYY4*ENSGALG0000000541655
TTC39C / tetratricopeptide repeat domain 39C / Q8N584*ENSGALG0000001506424


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019412  Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39
 IPR030416  Tetratricopeptide repeat protein 39A


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr