ENSG00000099834


Homo sapiens

Features
Gene ID: ENSG00000099834
  
Biological name :CDHR5
  
Synonyms : cadherin related family member 5 / CDHR5 / Q9HBB8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p15.5
Gene start: 616565
Gene end: 626078
  
Corresponding Affymetrix probe sets: 219796_s_at (Human Genome U133 Plus 2.0 Array)   220074_at (Human Genome U133 Plus 2.0 Array)   220075_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000351118
Ensembl peptide - ENSP00000437255
Ensembl peptide - ENSP00000436295
Ensembl peptide - ENSP00000435082
Ensembl peptide - ENSP00000431505
Ensembl peptide - ENSP00000380676
Ensembl peptide - ENSP00000345726
NCBI entrez gene - 53841     See in Manteia.
OMIM - 606839
RefSeq - XM_011520190
RefSeq - XM_006718253
RefSeq - XM_011520189
RefSeq - NM_001171968
RefSeq - NM_021924
RefSeq - NM_031264
RefSeq - XM_011520191
RefSeq - XM_011520188
RefSeq Peptide - NP_001165439
RefSeq Peptide - NP_068743
RefSeq Peptide - NP_112554
swissprot - Q9HBB8
swissprot - E9PPW2
swissprot - E9PKR2
swissprot - E9PLX6
swissprot - E9PMY2
Ensembl - ENSG00000099834
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FP245455.1ENSDARG00000098791Danio rerio
 ENSGALG00000034822Gallus gallus
 Cdhr5ENSMUSG00000025497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030326  Cadherin-related family member 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion ISS
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032532 regulation of microvillus length IMP
 biological_processGO:0090675 intermicrovillar adhesion IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0031526 brush border membrane IDA
 cellular_componentGO:0031528 microvillus membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0044214 spanning component of plasma membrane IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005509 calcium ion binding ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008013 beta-catenin binding IPI
 molecular_functionGO:0050839 cell adhesion molecule binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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