ENSMUSG00000025497


Mus musculus

Features
Gene ID: ENSMUSG00000025497
  
Biological name :Cdhr5
  
Synonyms : Cadherin-related family member 5 / Cdhr5 / Q8VHF2
  
Possible biological names infered from orthology : Q9HBB8
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F5
Gene start: 141269083
Gene end: 141276786
  
Corresponding Affymetrix probe sets: 10569113 (MoGene1.0st)   1426014_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000079484
Ensembl peptide - ENSMUSP00000148123
Ensembl peptide - ENSMUSP00000147472
Ensembl peptide - ENSMUSP00000127292
NCBI entrez gene - 72040     See in Manteia.
MGI - MGI:1919290
RefSeq - XM_006536260
RefSeq - NM_001114322
RefSeq - NM_028069
RefSeq Peptide - NP_001107794
RefSeq Peptide - NP_082345
swissprot - Q8VHF2
swissprot - A0PJK7
swissprot - A0A1B0GRD3
swissprot - A0A1B0GSY5
Ensembl - ENSMUSG00000025497
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FP245455.1ENSDARG00000098791Danio rerio
 ENSGALG00000034822Gallus gallus
 CDHR5ENSG00000099834Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030326  Cadherin-related family member 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032532 regulation of microvillus length IEA
 biological_processGO:0090675 intermicrovillar adhesion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0031526 brush border membrane IEA
 cellular_componentGO:0031528 microvillus membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0044214 spanning component of plasma membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008013 beta-catenin binding IEA
 molecular_functionGO:0050839 cell adhesion molecule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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