ENSG00000100321


Homo sapiens

Features
Gene ID: ENSG00000100321
  
Biological name :SYNGR1
  
Synonyms : O43759 / synaptogyrin 1 / SYNGR1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: 1
Band: q13.1
Gene start: 39349925
Gene end: 39385588
  
Corresponding Affymetrix probe sets: 204287_at (Human Genome U133 Plus 2.0 Array)   210613_s_at (Human Genome U133 Plus 2.0 Array)   213854_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385447
Ensembl peptide - ENSP00000332287
Ensembl peptide - ENSP00000412442
Ensembl peptide - ENSP00000370946
Ensembl peptide - ENSP00000216155
Ensembl peptide - ENSP00000318845
NCBI entrez gene - 9145     See in Manteia.
OMIM - 603925
RefSeq - NM_004711
RefSeq - NM_145731
RefSeq - NM_145738
RefSeq Peptide - NP_004702
RefSeq Peptide - NP_663783
RefSeq Peptide - NP_663791
swissprot - O43759
swissprot - A2A283
swissprot - F8WCE4
swissprot - B5MCD7
Ensembl - ENSG00000100321
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syngr1aENSDARG00000002564Danio rerio
 SYNGR1ENSGALG00000027665Gallus gallus
 O55100ENSMUSG00000022415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O43761 / SYNGR3 / synaptogyrin 3ENSG0000012756152
O43760 / SYNGR2 / synaptogyrin 2ENSG0000010863948
O95473 / SYNGR4 / synaptogyrin 4ENSG0000010546734


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain
 IPR016579  Synaptogyrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006605 protein targeting IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0045055 regulated exocytosis ISS
 biological_processGO:0048169 regulation of long-term neuronal synaptic plasticity ISS
 biological_processGO:0048172 regulation of short-term neuronal synaptic plasticity ISS
 biological_processGO:0048499 synaptic vesicle membrane organization ISS
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031594 neuromuscular junction IBA
 cellular_componentGO:0035577 azurophil granule membrane TAS
 cellular_componentGO:0042470 melanosome IEA
 cellular_componentGO:0043195 terminal bouton IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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