ENSG00000101199


Homo sapiens

Features
Gene ID: ENSG00000101199
  
Biological name :ARFGAP1
  
Synonyms : ADP ribosylation factor GTPase activating protein 1 / ARFGAP1 / Q8N6T3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: q13.33
Gene start: 63272785
Gene end: 63289793
  
Corresponding Affymetrix probe sets: 217888_s_at (Human Genome U133 Plus 2.0 Array)   234001_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000430500
Ensembl peptide - ENSP00000449849
Ensembl peptide - ENSP00000449800
Ensembl peptide - ENSP00000449515
Ensembl peptide - ENSP00000447037
Ensembl peptide - ENSP00000443716
Ensembl peptide - ENSP00000430929
Ensembl peptide - ENSP00000314615
Ensembl peptide - ENSP00000359298
Ensembl peptide - ENSP00000359306
Ensembl peptide - ENSP00000427717
Ensembl peptide - ENSP00000428355
Ensembl peptide - ENSP00000429674
Ensembl peptide - ENSP00000429770
NCBI entrez gene - 55738     See in Manteia.
OMIM - 608377
RefSeq - XM_017027950
RefSeq - NM_001281482
RefSeq - NM_001281483
RefSeq - NM_001281484
RefSeq - NM_018209
RefSeq - NM_175609
RefSeq - XM_006723823
RefSeq - XM_011528901
RefSeq Peptide - NP_060679
RefSeq Peptide - NP_001268411
RefSeq Peptide - NP_001268412
RefSeq Peptide - NP_783202
RefSeq Peptide - NP_001268413
swissprot - E5RGL6
swissprot - E5RHT6
swissprot - F8VWB3
swissprot - F8VWH9
swissprot - H0YIQ0
swissprot - F8W1U7
swissprot - Q8N6T3
swissprot - E5RIU2
swissprot - E5RHH7
swissprot - E5RHC5
Ensembl - ENSG00000101199
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARFGAP1ENSDARG00000101616Danio rerio
 ARFGAP1ENSGALG00000005781Gallus gallus
 Q9EPJ9ENSMUSG00000027575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001164  Arf GTPase activating protein
 IPR037278  ARFGAP/RecO-like zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030100 regulation of endocytosis IEA
 biological_processGO:0036498 IRE1-mediated unfolded protein response TAS
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005096 GTPase activator activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165527 ARF6 / P62330 / ADP ribosylation factor 6  / complex






 

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