ENSG00000101276


Homo sapiens

Features
Gene ID: ENSG00000101276
  
Biological name :SLC52A3
  
Synonyms : Q9NQ40 / SLC52A3 / solute carrier family 52 member 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p13
Gene start: 760080
Gene end: 776015
  
Corresponding Affymetrix probe sets: 228236_at (Human Genome U133 Plus 2.0 Array)   233451_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494009
Ensembl peptide - ENSP00000494193
Ensembl peptide - ENSP00000217254
Ensembl peptide - ENSP00000371370
Ensembl peptide - ENSP00000488723
NCBI entrez gene - 113278     See in Manteia.
OMIM - 613350
RefSeq - XM_005260655
RefSeq - XM_011529148
RefSeq - NM_033409
RefSeq Peptide - NP_212134
swissprot - Q9NQ40
swissprot - K0A6P4
Ensembl - ENSG00000101276
  
Related genetic diseases (OMIM): 211500 - ?Fazio-Londe disease, 211500
  211530 - Brown-Vialetto-Van Laere syndrome 1, 211530
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc52a3ENSDARG00000042737Danio rerio
 SLC52A3ENSGALG00000006194Gallus gallus
 Q9D6X5ENSMUSG00000027463Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9HAB3 / SLC52A2 / solute carrier family 52 member 2ENSG0000018580339
Q9NWF4 / SLC52A1 / solute carrier family 52 member 1ENSG0000013251739


Protein motifs (from Interpro)
Interpro ID Name
 IPR009357  Solute carrier family 52, riboflavin transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006771 riboflavin metabolic process TAS
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0032218 riboflavin transport IEA
 biological_processGO:0034605 cellular response to heat IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 molecular_functionGO:0032217 riboflavin transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Vitamin B2 (riboflavin) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000467 Neck muscle weakness 
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 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
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 HP:0000505 Impaired vision 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000543 Pale optic disks 
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 HP:0000544 External ophthalmoplegia 
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 HP:0000551 Abnormal color vision 
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 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
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 HP:0000738 Hallucinations 
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 HP:0000771 Gynecomastia 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000873 Diabetes insipidus "A state of excessive water intake and hypotonic (dilute) polyuria. Diabetes insipidus may be due to failure of vasopressin (AVP) release (central or neurogenic diabetes insipidus) or to a failure of the kidney to respond to AVP (nephrogenic diabetes insipidus)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001283 Bulbar palsy "Bulbar weakness (or bulbar palsy) refers to bilateral impairment of function of the lower cranial nerves IX, X, XI and XII, which occurs due to lower motor neuron lesion either at nuclear or fascicular level in the medulla or from bilateral lesions of the lower cranial nerves outside the brain-stem. Bulbar weakness is often associated with difficulty in chewing, weakness of the facial muscles, dysarthria, palatal weakness and regurgitation of fluids, dysphagia, and dysphonia." [HPO:curators]
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 HP:0001308 Tongue fasciculations 
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001349 Facial diplegia "Facial diplegia refers to simultaneous facial palsy (bilateral facial palsy is much rarer than unilateral facial palsy)." [HPO:curators]
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 HP:0001605 Vocal cord paralysis 
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 HP:0001621 Soft voice 
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 HP:0001730 Progressive hearing loss 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002058 Myopathic facies "A facial appearance characteristic of myopathic conditions. The face appears expressionless with sunken cheeks, bilateral ptosis, and inability to elevate the corners of the mouth, due to muscle weakness." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002098 Respiratory distress 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002312 Clumsiness 
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 HP:0002459 Dysautonomia 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002808 Kyphosis 
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 HP:0002877 Nocturnal hypoventilation 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003621 Juvenile onset 
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 HP:0003676 Progressive disorder 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0004326 Cachexia 
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 HP:0005951 Progressive inspiratory stridor 
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 HP:0007034 Generalized hyperreflexia 
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 HP:0007097 Cranial nerve motor loss 
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 HP:0007730 Reduced iris pigmentation 
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 HP:0008002 Macular pigmentary changes 
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 HP:0009113 Diaphragmatic weakness 
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 HP:0009130 Amyotrophy involving the musculature of the hand "Muscular atrophy involving the muscles of the hand." [HPO:curators]
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0010307 Stridor "Stridor is a high pitched sound resulting from turbulent air flow in the upper airway." [HPO:curators]
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 HP:0010535 Sleep apnea "An intermittent cessation of airflow at the mouth and nose during sleep. Apneas of at least 10 seconds are considered important, but persons with sleep apnea may have apneas of 20 seconds to up to 2 or 3 minutes. Patients may have up to 15 events per hour of sleep." [HPO:curators]
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0011448 Ankle clonus "Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Ankle clonus is tested by rapidly flexing the foot upward." [HPO:probinson]
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 HP:0011449 Knee clonus ".Clonus is an involuntary tendon reflex that causes repeated flexion and extension of the foot. Knee clonus can be tested by rapidly pushing the patella towards the toes." [HPO:probinson]
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 HP:0012473 Tongue atrophy "Wasting of the `tongue` (FMA:54640)." [ORCID:0000-0001-5208-3432]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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