ENSG00000185803


Homo sapiens

Features
Gene ID: ENSG00000185803
  
Biological name :SLC52A2
  
Synonyms : Q9HAB3 / SLC52A2 / solute carrier family 52 member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q24.3
Gene start: 144354135
Gene end: 144361286
  
Corresponding Affymetrix probe sets: 218151_x_at (Human Genome U133 Plus 2.0 Array)   222155_s_at (Human Genome U133 Plus 2.0 Array)   239416_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000433796
Ensembl peptide - ENSP00000434239
Ensembl peptide - ENSP00000496184
Ensembl peptide - ENSP00000436917
Ensembl peptide - ENSP00000436768
Ensembl peptide - ENSP00000435820
Ensembl peptide - ENSP00000434728
Ensembl peptide - ENSP00000333638
Ensembl peptide - ENSP00000385961
Ensembl peptide - ENSP00000431965
Ensembl peptide - ENSP00000433583
NCBI entrez gene - 79581     See in Manteia.
OMIM - 607882
RefSeq - XM_006716660
RefSeq - XM_006716658
RefSeq - XM_006716659
RefSeq - XM_017013820
RefSeq - XM_017013819
RefSeq - NM_001253815
RefSeq - NM_001253816
RefSeq - NM_024531
RefSeq - XM_017013822
RefSeq - XM_017013821
RefSeq - XM_011517300
RefSeq Peptide - NP_078807
RefSeq Peptide - NP_001240744
RefSeq Peptide - NP_001240745
swissprot - Q9HAB3
swissprot - E9PRC3
swissprot - E9PIX2
swissprot - E9PJC1
swissprot - E9PKE4
swissprot - E9PPS0
Ensembl - ENSG00000185803
  
Related genetic diseases (OMIM): 614707 - Brown-Vialetto-Van Laere syndrome 2, 614707
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc52a2ENSDARG00000102035Danio rerio
 Q9D8F3ENSMUSG00000022560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9NWF4 / SLC52A1 / solute carrier family 52 member 1ENSG0000013251786
Q9NQ40 / SLC52A3 / solute carrier family 52 member 3ENSG0000010127642


Protein motifs (from Interpro)
Interpro ID Name
 IPR009357  Solute carrier family 52, riboflavin transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006771 riboflavin metabolic process TAS
 biological_processGO:0032218 riboflavin transport IEA
 biological_processGO:0046718 viral entry into host cell IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001618 virus receptor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0032217 riboflavin transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Vitamin B2 (riboflavin) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000467 Neck muscle weakness 
Show

 HP:0000496 Abnormality of eye movement "An abnormality in voluntary or involuntary eye movements or their control." [HPO:probinson]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
Show

 HP:0000543 Pale optic disks 
Show

 HP:0000551 Abnormal color vision 
Show

 HP:0000572 Visual loss 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
Show

 HP:0000738 Hallucinations 
Show

 HP:0000771 Gynecomastia 
Show

 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
Show

 HP:0000873 Diabetes insipidus "A state of excessive water intake and hypotonic (dilute) polyuria. Diabetes insipidus may be due to failure of vasopressin (AVP) release (central or neurogenic diabetes insipidus) or to a failure of the kidney to respond to AVP (nephrogenic diabetes insipidus)." [HPO:curators]
Show

 HP:0001171 Ectrodactyly (hands) 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
Show

 HP:0001265 Hyporeflexia 
Show

 HP:0001283 Bulbar palsy "Bulbar weakness (or bulbar palsy) refers to bilateral impairment of function of the lower cranial nerves IX, X, XI and XII, which occurs due to lower motor neuron lesion either at nuclear or fascicular level in the medulla or from bilateral lesions of the lower cranial nerves outside the brain-stem. Bulbar weakness is often associated with difficulty in chewing, weakness of the facial muscles, dysarthria, palatal weakness and regurgitation of fluids, dysphagia, and dysphonia." [HPO:curators]
Show

 HP:0001284 Areflexia 
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001308 Tongue fasciculations 
Show

 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
Show

 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
Show

 HP:0001730 Progressive hearing loss 
Show

 HP:0001992 Organic aciduria 
Show

 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
Show

 HP:0002093 Respiratory insufficiency 
Show

 HP:0002120 Cerebral cortical atrophy 
Show

 HP:0002312 Clumsiness 
Show

 HP:0002375 Hypokinesia 
Show

 HP:0002459 Dysautonomia 
Show

 HP:0002751 Kyphoscoliosis 
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003676 Progressive disorder 
Show

 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
Show

 HP:0003700 Generalized amyotrophy "Generalized wasting of loss of muscle tissue." [HPO:curators]
Show

 HP:0003828 Variable expressivity 
Show

 HP:0004326 Cachexia 
Show

 HP:0007730 Reduced iris pigmentation 
Show

 HP:0008002 Macular pigmentary changes 
Show

 HP:0010535 Sleep apnea "An intermittent cessation of airflow at the mouth and nose during sleep. Apneas of at least 10 seconds are considered important, but persons with sleep apnea may have apneas of 20 seconds to up to 2 or 3 minutes. Patients may have up to 15 events per hour of sleep." [HPO:curators]
Show

 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr