ENSG00000101901


Homo sapiens

Features
Gene ID: ENSG00000101901
  
Biological name :ALG13
  
Synonyms : ALG13 / ALG13, UDP-N-acetylglucosaminyltransferase subunit / Q9NP73
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q23
Gene start: 111665811
Gene end: 111760649
  
Corresponding Affymetrix probe sets: 205583_s_at (Human Genome U133 Plus 2.0 Array)   205584_at (Human Genome U133 Plus 2.0 Array)   219015_s_at (Human Genome U133 Plus 2.0 Array)   222808_at (Human Genome U133 Plus 2.0 Array)   232435_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000481509
Ensembl peptide - ENSP00000480711
Ensembl peptide - ENSP00000482257
Ensembl peptide - ENSP00000490681
Ensembl peptide - ENSP00000485658
Ensembl peptide - ENSP00000485624
Ensembl peptide - ENSP00000485420
Ensembl peptide - ENSP00000485400
Ensembl peptide - ENSP00000485392
Ensembl peptide - ENSP00000485333
Ensembl peptide - ENSP00000485279
Ensembl peptide - ENSP00000485181
Ensembl peptide - ENSP00000485093
Ensembl peptide - ENSP00000485071
Ensembl peptide - ENSP00000485067
Ensembl peptide - ENSP00000484523
Ensembl peptide - ENSP00000251943
Ensembl peptide - ENSP00000361047
Ensembl peptide - ENSP00000378260
Ensembl peptide - ENSP00000392990
Ensembl peptide - ENSP00000426892
Ensembl peptide - ENSP00000427093
Ensembl peptide - ENSP00000477513
Ensembl peptide - ENSP00000478130
Ensembl peptide - ENSP00000479424
Ensembl peptide - ENSP00000479483
Ensembl peptide - ENSP00000479632
Ensembl peptide - ENSP00000479731
Ensembl peptide - ENSP00000480638
NCBI entrez gene - 79868     See in Manteia.
OMIM - 300776
RefSeq - XM_017029855
RefSeq - NM_001168385
RefSeq - NM_001257230
RefSeq - NM_001257231
RefSeq - NM_001257234
RefSeq - NM_001257235
RefSeq - NM_001257237
RefSeq - NM_001257239
RefSeq - NM_001257240
RefSeq - NM_001257241
RefSeq - NM_001324290
RefSeq - NM_001324291
RefSeq - NM_001324292
RefSeq - NM_001324293
RefSeq - NM_001324294
RefSeq - NM_018466
RefSeq - XM_006724693
RefSeq - XM_006724697
RefSeq - XM_006724698
RefSeq - XM_011531028
RefSeq - XM_011531030
RefSeq - XM_011531031
RefSeq - XM_011531032
RefSeq - XM_011531033
RefSeq - XM_011531034
RefSeq - XM_017029846
RefSeq - XM_017029847
RefSeq - XM_017029848
RefSeq - XM_017029849
RefSeq - XM_017029850
RefSeq - XM_017029851
RefSeq - XM_017029852
RefSeq - XM_017029853
RefSeq - NM_001039210
RefSeq - NM_001099922
RefSeq Peptide - NP_001093392
RefSeq Peptide - NP_001244159
RefSeq Peptide - NP_001244160
RefSeq Peptide - NP_001244163
RefSeq Peptide - NP_001244164
RefSeq Peptide - NP_001244166
RefSeq Peptide - NP_001244168
RefSeq Peptide - NP_001244169
RefSeq Peptide - NP_001244170
RefSeq Peptide - NP_001311219
RefSeq Peptide - NP_001311220
RefSeq Peptide - NP_001311221
RefSeq Peptide - NP_001311222
RefSeq Peptide - NP_001311223
RefSeq Peptide - NP_060936
RefSeq Peptide - NP_001034299
RefSeq Peptide - NP_001161857
swissprot - A0A1B0GVW6
swissprot - A0A096LPK3
swissprot - A0A096LPI3
swissprot - A0A096LP54
swissprot - A0A096LP10
swissprot - A0A096LNL2
swissprot - A0A096LNJ5
swissprot - A0A096LNJ4
swissprot - A0A087WX43
swissprot - A0A087WX01
swissprot - A0A087WVG5
swissprot - A0A087WTT9
swissprot - Q9NP73
swissprot - A0A087WT15
swissprot - D6RE84
Ensembl - ENSG00000101901
  
Related genetic diseases (OMIM): 300884 - ?Congenital disorder of glycosylation, type Is, 300884
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alg13ENSDARG00000054374Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OTUD4 / Q01804 / OTU deubiquitinase 4ENSG0000016416420
OTUD5 / Q96G74 / OTU deubiquitinase 5ENSG000000683087


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR003323  OTU domain
 IPR007235  Glycosyl transferase, family 28, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006488 dolichol-linked oligosaccharide biosynthetic process TAS
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0043541 UDP-N-acetylglucosamine transferase complex IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004577 N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000238 Hydrocephalus 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000331 Small chin 
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 HP:0000343 Long philtrum 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000666 Nystagmus, horizontal 
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 HP:0000717 Autism 
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 HP:0000750 Impaired language development 
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 HP:0000817 Poor eye contact 
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 HP:0001181 Adducted thumbs 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001423 X-linked dominant inheritance "A mode of inheritance that is observed for dominant traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked dominant disorders tend to manifest very severely in affected males. The severity of manifestation in females may depend on the degree of skewed X inactivation." [HPO:curators]
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 HP:0001999 Facial dysmorphism 
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 HP:0002059 Cerebral atrophy 
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 HP:0002071 Extrapyramidal signs 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002283 Diffuse brain atrophy 
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 HP:0002312 Clumsiness 
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 HP:0002421 Poor head control 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0002719 Recurrent infections 
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 HP:0003593 Early onset 
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 HP:0003642 Abnormal isoelectric focusing of serum transferrin (type 1 pattern) 
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 HP:0004325 Decreased body weight 
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 HP:0007256 Mild pyramidal signs 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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 HP:0012469 Infantile spasms "Infantile spasms represent a subset of "epileptic spasms". Infantile Spasms are epileptic spasms starting in the first year of life (infancy)." [HPO:ihelbig]
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 HP:0030047 Abnormality of lateral ventricle "A morphological anomal of the lateral ventricle." []
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000172339 ALG14 / Q96F25 / ALG14, UDP-N-acetylglucosaminyltransferase subunit  / complex






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr