ENSG00000102683


Homo sapiens

Features
Gene ID: ENSG00000102683
  
Biological name :SGCG
  
Synonyms : Q13326 / sarcoglycan gamma / SGCG
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: 1
Band: q12.12
Gene start: 23180952
Gene end: 23325165
  
Corresponding Affymetrix probe sets: 207302_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000218867
NCBI entrez gene - 6445     See in Manteia.
OMIM - 608896
RefSeq - XM_006719861
RefSeq - NM_000231
RefSeq - XM_005266505
RefSeq Peptide - NP_000222
swissprot - Q13326
Ensembl - ENSG00000102683
  
Related genetic diseases (OMIM): 253700 - Muscular dystrophy, limb-girdle, type 2C, 253700
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgcgENSDARG00000038107Danio rerio
 SGCGENSGALG00000017122Gallus gallus
 SgcgENSMUSG00000035296Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGCZ / Q96LD1 / sarcoglycan zetaENSG0000018505357
SGCD / Q92629 / sarcoglycan deltaENSG0000017062452


Protein motifs (from Interpro)
Interpro ID Name
 IPR006875  Sarcoglycan complex subunit protein
 IPR027660  Gamma-sarcoglycan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development TAS
 biological_processGO:0048738 cardiac muscle tissue development IBA
 biological_processGO:0055001 muscle cell development IBA
 biological_processGO:0060047 heart contraction IBA
 biological_processGO:0061024 membrane organization IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016011 dystroglycan complex IEA
 cellular_componentGO:0016012 sarcoglycan complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042383 sarcolemma IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001667 Right ventricular hypertrophy "In this case the right ventricle is more muscular than normal, causing a characteristic boot-shaped (coeur-en-sabot) appearance as seen on anterior- posterior chest x-rays. Right ventricular hypertrophy is commonly associated with any form of right ventricular outflow obstruction or pulmonary hypertension, which may in turn owe its origin to left-sided disease. The echocardiographic signs are thickening of the anterior right ventricular wall and the septum. Cavity size is usually normal, or slightly enlarged. In many cases there is associated volume overload present due to tricuspid regurgitation, in the absence of this, septal motion is normal. This feature can also be a component of the separat entity tetralogy of Fallot in which case it is generally agreed to be a secondary anomaly, as the level of hypertrophy generally increases with age." [HPO:curators]
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 HP:0002090 Pneumonia 
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 HP:0002091 Restrictive lung disease 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003307 Hyperlordosis 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003560 Muscular dystrophy "The term dystrophy means abnormal growth. However, muscular dystrophy is used to describe primary myopathies with a genetic basis and a progressive course characterized by progressive skeletal muscle weakness, defects in muscle proteins, and the apoptosis of muscle cells." [HPO:curators]
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 HP:0003678 Rapidly progressive 
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 HP:0003707 Calf muscle pseudohypertrophy 
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 HP:0003713 Muscle fiber necrosis "Abnormal cell death involving muscle fibers usually associated with break in, or absence of, muscle surface fiber membrane and resulting in irreversible damage to muscle fibers." [HPO:curators]
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 HP:0005133 Right ventricular dilatation 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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