ENSG00000102854


Homo sapiens

Features
Gene ID: ENSG00000102854
  
Biological name :MSLN
  
Synonyms : mesothelin / MSLN / Q13421
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 760762
Gene end: 768865
  
Corresponding Affymetrix probe sets: 204885_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000458003
Ensembl peptide - ENSP00000456702
Ensembl peptide - ENSP00000457847
Ensembl peptide - ENSP00000372313
Ensembl peptide - ENSP00000442965
Ensembl peptide - ENSP00000454295
Ensembl peptide - ENSP00000456008
Ensembl peptide - ENSP00000456132
NCBI entrez gene - 10232     See in Manteia.
OMIM - 601051
RefSeq - XM_017022858
RefSeq - NM_013404
RefSeq - XM_005255034
RefSeq - XM_011522348
RefSeq - XM_017022853
RefSeq - XM_017022854
RefSeq - XM_017022855
RefSeq - XM_017022856
RefSeq - XM_017022857
RefSeq - NM_001177355
RefSeq - NM_005823
RefSeq Peptide - NP_037536
RefSeq Peptide - NP_001170826
RefSeq Peptide - NP_005814
swissprot - H3BR90
swissprot - H3BMA1
swissprot - Q13421
swissprot - H3BUX1
swissprot - H3BV92
Ensembl - ENSG00000102854
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01052573.1ENSDARG00000100739Danio rerio
 mslnaENSDARG00000098949Danio rerio
 si:ch211-188p14.4ENSDARG00000100190Danio rerio
 si:ch211-188p14.5ENSDARG00000099024Danio rerio
 ENSGALG00000005349Gallus gallus
 MslnENSMUSG00000063011Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MSLNL / Q96KJ4 / mesothelin-likeENSG0000016200623


Protein motifs (from Interpro)
Interpro ID Name
 IPR010335  Mesothelin
 IPR026664  Stereocilin-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006501 C-terminal protein lipidation TAS
 biological_processGO:0007155 cell adhesion NAS
 biological_processGO:0007160 cell-matrix adhesion IBA
 biological_processGO:0031016 pancreas development IEA
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0044267 cellular protein metabolic process TAS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane NAS
 cellular_componentGO:0031225 anchored component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Post-translational modification: synthesis of GPI-anchored proteins
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr