ENSG00000102935


Homo sapiens

Features
Gene ID: ENSG00000102935
  
Biological name :ZNF423
  
Synonyms : Q2M1K9 / zinc finger protein 423 / ZNF423
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: q12.1
Gene start: 49487524
Gene end: 49857919
  
Corresponding Affymetrix probe sets: 214761_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457928
Ensembl peptide - ENSP00000457664
Ensembl peptide - ENSP00000479288
Ensembl peptide - ENSP00000262383
Ensembl peptide - ENSP00000442321
Ensembl peptide - ENSP00000455061
Ensembl peptide - ENSP00000455426
Ensembl peptide - ENSP00000455588
NCBI entrez gene - 23090     See in Manteia.
OMIM - 604557
RefSeq - XM_017023078
RefSeq - NM_015069
RefSeq - XM_005255856
RefSeq - XM_005255857
RefSeq - XM_006721171
RefSeq - XM_017023076
RefSeq - XM_017023077
RefSeq - NM_001271620
RefSeq - NM_001330533
RefSeq Peptide - NP_055884
RefSeq Peptide - NP_001258549
RefSeq Peptide - NP_001317462
swissprot - F5H7S1
swissprot - Q2M1K9
swissprot - A0A087WV99
Ensembl - ENSG00000102935
  
Related genetic diseases (OMIM): 614844 - Joubert syndrome 19, 614844

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A1L1R6ENSDARG00000059707Danio rerio
 znf423ENSDARG00000095732Danio rerio
 ZNF423ENSGALG00000003891Gallus gallus
 Q80TS5ENSMUSG00000045333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96K83 / ZNF521 / zinc finger protein 521ENSG0000019879563


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007219 Notch signaling pathway ISS
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030513 positive regulation of BMP signaling pathway ISS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000083 Renal failure 
Show

 HP:0000090 Nephronophthisis 
Show

 HP:0000112 Nephropathy "A nonspecific term referring to disease or damage of the kidneys." [HPO:curators]
Show

 HP:0000113 Polycystic kidney 
Show

 HP:0000238 Hydrocephalus 
Show

 HP:0000276 Long face 
Show

 HP:0000368 Low-set, posteriorly rotated ears 
Show

 HP:0000426 Prominent nasal bridge 
Show

 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
Show

 HP:0000546 Retinal degeneration 
Show

 HP:0000556 Retinal dystrophy 
Show

 HP:0000567 Chorioretinal coloboma 
Show

 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
Show

 HP:0000618 Blindness 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000729 Pervasive developmental disorder 
Show

 HP:0000864 Abnormality of the hypothalamus-pituitary axis 
Show

 HP:0001161 Polydactyly (hands) 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001320 Cerebellar vermis hypoplasia 
Show

 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
Show

 HP:0001829 Polydactyly (feet) 
Show

 HP:0002084 Encephalocele 
Show

 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
Show

 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
Show

 HP:0002269 Neuronal migration disorder 
Show

 HP:0002419 Molar tooth sign on MRI 
Show

 HP:0002553 Arched eyebrows 
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002789 Tachypnea 
Show

 HP:0003812 Phenotypic variability 
Show

 HP:0004422 Biparietal narrowing "A narrowing of the biparietal diameter (i.e., of the transverse distance between the protuberances of the two parietal bones of the skull)." [HPO:curators]
Show

 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr