ENSG00000103227


Homo sapiens

Features
Gene ID: ENSG00000103227
  
Biological name :LMF1
  
Synonyms : lipase maturation factor 1 / LMF1 / Q96S06
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p13.3
Gene start: 853634
Gene end: 981318
  
Corresponding Affymetrix probe sets: 1569048_s_at (Human Genome U133 Plus 2.0 Array)   219135_s_at (Human Genome U133 Plus 2.0 Array)   219136_s_at (Human Genome U133 Plus 2.0 Array)   46142_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457725
Ensembl peptide - ENSP00000456631
Ensembl peptide - ENSP00000458135
Ensembl peptide - ENSP00000262301
Ensembl peptide - ENSP00000437418
Ensembl peptide - ENSP00000443820
Ensembl peptide - ENSP00000454672
Ensembl peptide - ENSP00000455162
Ensembl peptide - ENSP00000455715
Ensembl peptide - ENSP00000455833
Ensembl peptide - ENSP00000455930
NCBI entrez gene - 64788     See in Manteia.
OMIM - 611761
RefSeq - XM_017023580
RefSeq - NM_001352017
RefSeq - NM_022773
RefSeq - XM_006720928
RefSeq - XM_006720929
RefSeq - XM_011522614
RefSeq - XM_011522617
RefSeq - XM_017023575
RefSeq - XM_017023576
RefSeq - XM_017023577
RefSeq - XM_017023578
RefSeq - XM_017023579
RefSeq Peptide - NP_001338950
RefSeq Peptide - NP_073610
RefSeq Peptide - NP_001338946
swissprot - H3BN37
swissprot - H3BP58
swissprot - H3BQC9
swissprot - H3BQT4
swissprot - H3BSB7
swissprot - H3BUN8
swissprot - H3BVI4
swissprot - Q96S06
swissprot - B4DFZ0
swissprot - F5H802
Ensembl - ENSG00000103227
  
Related genetic diseases (OMIM): 246650 - Lipase deficiency, combined, 246650
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01073168.1ENSDARG00000102861Danio rerio
 LMF1ENSGALG00000044187Gallus gallus
 Lmf1ENSMUSG00000002279Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMF2 / Q9BU23 / lipase maturation factor 2ENSG0000010025830


Protein motifs (from Interpro)
Interpro ID Name
 IPR009613  Lipase maturation factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006641 triglyceride metabolic process IMP
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0009306 protein secretion IEA
 biological_processGO:0033578 protein glycosylation in Golgi IEA
 biological_processGO:0034382 chylomicron remnant clearance IEA
 biological_processGO:0051004 regulation of lipoprotein lipase activity TAS
 biological_processGO:0051006 positive regulation of lipoprotein lipase activity IEA
 biological_processGO:0051604 protein maturation IBA
 biological_processGO:0090181 regulation of cholesterol metabolic process IEA
 biological_processGO:0090207 regulation of triglyceride metabolic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Assembly of active LPL and LIPC lipase complexes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000660 Lipemia retinalis 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000726 Dementia 
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 HP:0000819 Diabetes mellitus 
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0001013 Eruptive xanthomas 
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 HP:0001397 Hepatic steatosis 
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 HP:0001433 Hepatosplenomegaly 
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 HP:0001508 Failure to thrive 
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 HP:0001735 Pancreatitis, acute 
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 HP:0001939 Metabolism abnormality 
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 HP:0002017 Nausea and vomiting 
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 HP:0002155 Hypertriglyceridemia 
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 HP:0002204 Pulmonary embolism 
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 HP:0002354 Memory impairment 
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 HP:0002574 Episodic abdominal pain 
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 HP:0009789 Perianal abscess "The presence of an abscess located around the anus." [HPO:curators]
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 HP:0012238 Hyperchylomicronemia "Increased plasma concentrations of chylomicrons, the large lipid droplet (up to 100 mm in diameter) of reprocessed lipid synthesized in epithelial cells of the small intestine and containing triacylglycerols, cholesterol esters, and several apolipoproteins." [HPO:probinson, MP:0009699]
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 HP:0100027 Recurrent pancreatitis "A `recurrent` (PATO:0000427) form of `pancreatitis` (HP:0001733)." [HPO:probinson]
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 HP:0100851 Abnormal emotion/affect behaviour "An abnormality of emotional behaviour." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166035 LIPC / P11150 / lipase C, hepatic type  / reaction / complex






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr