ENSG00000103544


Homo sapiens

Features
Gene ID: ENSG00000103544
  
Biological name :VPS35L
  
Synonyms : Q7Z3J2 / VPS35 endosomal protein sorting factor like / VPS35L
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p12.3
Gene start: 19555240
Gene end: 19706793
  
Corresponding Affymetrix probe sets: 1558557_at (Human Genome U133 Plus 2.0 Array)   203173_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457973
Ensembl peptide - ENSP00000458116
Ensembl peptide - ENSP00000459108
Ensembl peptide - ENSP00000251143
Ensembl peptide - ENSP00000395973
Ensembl peptide - ENSP00000398009
Ensembl peptide - ENSP00000400815
Ensembl peptide - ENSP00000438557
Ensembl peptide - ENSP00000438852
Ensembl peptide - ENSP00000442468
Ensembl peptide - ENSP00000455045
Ensembl peptide - ENSP00000456425
Ensembl peptide - ENSP00000457190
Ensembl peptide - ENSP00000457779
NCBI entrez gene - 57020     See in Manteia.
RefSeq - XM_011545897
RefSeq - NM_001300743
RefSeq - NM_020314
RefSeq - XM_005255435
RefSeq - XM_006721065
RefSeq - XM_011545896
RefSeq Peptide - NP_064710
RefSeq Peptide - NP_001287672
swissprot - H3BUS7
swissprot - H3BV68
swissprot - H3BVG8
swissprot - I3L1U5
swissprot - Q7Z3J2
swissprot - C9J7I2
swissprot - E7EWW0
swissprot - F5H7K1
swissprot - F6S1J4
swissprot - H0YFG6
swissprot - H3BRV8
swissprot - H3BNX2
swissprot - H3BTI5
Ensembl - ENSG00000103544
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A4VCH4ENSDARG00000020041Danio rerio
 VPS35LENSGALG00000002119Gallus gallus
 Q8BWQ6ENSMUSG00000030982Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR029705  UPF0505 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006893 Golgi to plasma membrane transport IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0101003 ficolin-1-rich granule membrane TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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