ENSG00000103671


Homo sapiens

Features
Gene ID: ENSG00000103671
  
Biological name :TRIP4
  
Synonyms : Q15650 / thyroid hormone receptor interactor 4 / TRIP4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q22.31
Gene start: 64387748
Gene end: 64455303
  
Corresponding Affymetrix probe sets: 203732_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000452764
Ensembl peptide - ENSP00000453276
Ensembl peptide - ENSP00000454558
Ensembl peptide - ENSP00000261884
Ensembl peptide - ENSP00000452675
Ensembl peptide - ENSP00000453106
NCBI entrez gene - 9325     See in Manteia.
OMIM - 604501
RefSeq - NM_001321924
RefSeq - NM_016213
RefSeq Peptide - NP_001308853
RefSeq Peptide - NP_057297
swissprot - Q15650
swissprot - H0YK63
swissprot - H0YKD9
swissprot - H0YL91
swissprot - H0YLN7
swissprot - H3BMU9
Ensembl - ENSG00000103671
  
Related genetic diseases (OMIM): 616866 - Spinal muscular atrophy with congenital bone fractures 1, 616866
  617066 - ?Muscular dystrophy, congenital, Davignon-Chauveau type, 617066
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trip4ENSDARG00000098074Danio rerio
 TRIP4ENSGALG00000030672Gallus gallus
 Trip4ENSMUSG00000032386Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007374  ASCH domain
 IPR009349  Zinc finger, C2HC5-type
 IPR015947  PUA-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030520 intracellular estrogen receptor signaling pathway IDA
 biological_processGO:0045661 regulation of myoblast differentiation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:1901998 toxin transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0031594 neuromuscular junction IMP
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0099053 activating signal cointegrator 1 complex IDA
 molecular_functionGO:0002020 protease binding IPI
 molecular_functionGO:0003713 transcription coactivator activity IMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016922 nuclear receptor binding IDA
 molecular_functionGO:0019901 protein kinase binding IPI
 molecular_functionGO:0030331 estrogen receptor binding IPI
 molecular_functionGO:0035035 histone acetyltransferase binding IPI
 molecular_functionGO:0044389 ubiquitin-like protein ligase binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000308 Microretrognathia 
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 HP:0000316 Hypertelorism 
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 HP:0000467 Neck muscle weakness 
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 HP:0000958 Dry skin 
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001562 Oligohydramnios 
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 HP:0001622 Premature birth 
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001638 Cardiomyopathy 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001655 Patent foramen ovale 
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 HP:0001684 Secundum atrial septal defect 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002643 Neonatal respiratory distress 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0003306 Spinal rigidity 
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 HP:0003477 Axonal neuropathy 
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003560 Muscular dystrophy "The term dystrophy means abnormal growth. However, muscular dystrophy is used to describe primary myopathies with a genetic basis and a progressive course characterized by progressive skeletal muscle weakness, defects in muscle proteins, and the apoptosis of muscle cells." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0003687 Centralized nuclei 
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 HP:0003700 Generalized amyotrophy "Generalized wasting of loss of muscle tissue." [HPO:curators]
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 HP:0005855 Multiple prenatal fractures "The presence of bone fractures in the prenatal period that are diagnosed at birth or before." [HPO:curators]
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0007502 Follicular hyperkeratosis 
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 HP:0009110 Diaphragmatic eventration "A congenital failure of muscular development of part or all of one or both hemidiaphragms, resulting in superior displacement of abdominal viscera and altered lung development." [HPO:curators]
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 HP:0100295 Muscle fiber atrophy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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