ENSG00000104835


Homo sapiens

Features
Gene ID: ENSG00000104835
  
Biological name :SARS2
  
Synonyms : Q9NP81 / SARS2 / seryl-tRNA synthetase 2, mitochondrial
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.2
Gene start: 38915266
Gene end: 38930896
  
Corresponding Affymetrix probe sets: 218702_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472339
Ensembl peptide - ENSP00000472847
Ensembl peptide - ENSP00000472576
Ensembl peptide - ENSP00000221431
Ensembl peptide - ENSP00000406754
Ensembl peptide - ENSP00000414954
Ensembl peptide - ENSP00000468865
Ensembl peptide - ENSP00000471767
NCBI entrez gene - 54938     See in Manteia.
OMIM - 612804
RefSeq - NM_001145901
RefSeq - NM_017827
RefSeq Peptide - NP_001139373
RefSeq Peptide - NP_060297
swissprot - M0R2H5
swissprot - B4DJM9
swissprot - Q9NP81
swissprot - M0QWZ7
swissprot - M0QX29
swissprot - M0R1C0
swissprot - M0R259
Ensembl - ENSG00000104835
  
Related genetic diseases (OMIM): 613845 - Hyperuricemia, pulmonary hypertension, renal failure, and alkalosis, 613845
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sars2ENSDARG00000102736Danio rerio
 ENSGALG00000035641Gallus gallus
 Sars2ENSMUSG00000070699Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC011455.2ENSG0000026954781


Protein motifs (from Interpro)
Interpro ID Name
 IPR002314  Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
 IPR002317  Serine-tRNA ligase, type1
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR010978  Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm
 IPR033729  Serine-tRNA ligase catalytic core domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation TAS
 biological_processGO:0006434 seryl-tRNA aminoacylation IEA
 biological_processGO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISS
 cellular_componentGO:0005759 mitochondrial matrix TAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004828 serine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
Mitochondrial tRNA aminoacylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000093 Proteinuria 
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 HP:0000103 Polyuria 
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 HP:0000127 Renal salt wasting 
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 HP:0000819 Diabetes mellitus 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001622 Premature birth 
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 HP:0001873 Thrombocytopenia 
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 HP:0001882 Leukopenia 
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 HP:0001903 Anemia 
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 HP:0002092 Pulmonary hypertension 
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 HP:0002149 Hyperuricemia "An abnormally high level of uric acid in the blood." [HPO:curators]
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 HP:0002878 Early respiratory failure 
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 HP:0002902 Hyponatremia 
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 HP:0002917 Hypomagnesemia 
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 HP:0003554 Type 2 muscle fiber atrophy "Atrophy (wasting) affecting primary type 2 muscle fibers. This feature in general can only be observed on muscle biopsy." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0004719 enlarged, hyperechogenic kidneys 
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 HP:0005977 Hypochloremic metabolic alkalosis 
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012622 Chronic kidney disease "Functional anomaly of the kidney persisting for at least three months." [Eurenomics:ewuehl]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000104835 SARS2 / Q9NP81 / seryl-tRNA synthetase 2, mitochondrial  / complex






 

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