ENSG00000104976


Homo sapiens

Features
Gene ID: ENSG00000104976
  
Biological name :SNAPC2
  
Synonyms : Q13487 / small nuclear RNA activating complex polypeptide 2 / SNAPC2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.2
Gene start: 7920316
Gene end: 7923250
  
Corresponding Affymetrix probe sets: 204104_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000469475
Ensembl peptide - ENSP00000471962
Ensembl peptide - ENSP00000221573
NCBI entrez gene - 6618     See in Manteia.
OMIM - 605076
RefSeq - NM_003083
RefSeq Peptide - NP_003074
swissprot - Q13487
swissprot - M0QXY9
swissprot - M0R1L8
Ensembl - ENSG00000104976
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc2ENSDARG00000036473Danio rerio
 Q91XA5ENSMUSG00000011837Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021281  Small nuclear RNA activating complex subunit 2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006383 transcription by RNA polymerase III TAS
 biological_processGO:0009301 snRNA transcription TAS
 biological_processGO:0042795 snRNA transcription by RNA polymerase II TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016604 nuclear body IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Abortive And Retractive Initiation
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr