ENSMUSG00000011837


Mus musculus

Features
Gene ID: ENSMUSG00000011837
  
Biological name :Snapc2
  
Synonyms : Q91XA5 / Snapc2 / snRNA-activating protein complex subunit 2
  
Possible biological names infered from orthology : Q13487 / small nuclear RNA activating complex polypeptide 2
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: A1.1
Gene start: 4253080
Gene end: 4256220
  
Corresponding Affymetrix probe sets: 10569953 (MoGene1.0st)   1436703_x_at (Mouse Genome 430 2.0 Array)   1448726_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000011981
Ensembl peptide - ENSMUSP00000146771
Ensembl peptide - ENSMUSP00000146560
Ensembl peptide - ENSMUSP00000146378
NCBI entrez gene - 102209     See in Manteia.
MGI - MGI:1914861
RefSeq - XM_006508683
RefSeq - NM_133968
RefSeq Peptide - NP_598729
swissprot - A0A140LHV3
swissprot - A0A140LID1
swissprot - Q91XA5
swissprot - A0A140LHE1
Ensembl - ENSMUSG00000011837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapc2ENSDARG00000036473Danio rerio
 Q13487ENSG00000104976Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR021281  Small nuclear RNA activating complex subunit 2-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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