ENSG00000105641


Homo sapiens

Features
Gene ID: ENSG00000105641
  
Biological name :SLC5A5
  
Synonyms : Q92911 / SLC5A5 / solute carrier family 5 member 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.11
Gene start: 17871973
Gene end: 17895174
  
Corresponding Affymetrix probe sets: 211123_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000222248
NCBI entrez gene - 6528     See in Manteia.
OMIM - 601843
RefSeq - XM_017027158
RefSeq - NM_000453
RefSeq - XM_011528193
RefSeq - XM_011528194
RefSeq - XM_011528192
RefSeq Peptide - NP_000444
swissprot - Q92911
Ensembl - ENSG00000105641
  
Related genetic diseases (OMIM): 274400 - Thyroid dyshormonogenesis 1, 274400
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc5a5ENSDARG00000005392Danio rerio
 SLC5A5ENSGALG00000041932Gallus gallus
 Slc5a5ENSMUSG00000000792Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8N695 / SLC5A8 / solute carrier family 5 member 8ENSG0000025687046
Q1EHB4 / SLC5A12 / solute carrier family 5 member 12ENSG0000014894243
Q9Y289 / SLC5A6 / solute carrier family 5 member 6ENSG0000013807437
Q8WWX8 / SLC5A11 / solute carrier family 5 member 11ENSG0000015886522
P31639 / SLC5A2 / solute carrier family 5 member 2ENSG0000014067521
Q2M3M2 / SLC5A9 / solute carrier family 5 member 9ENSG0000011783420
Q9NY91 / SLC5A4 / solute carrier family 5 member 4ENSG0000010019120
P13866 / SLC5A1 / solute carrier family 5 member 1ENSG0000010017020
P53794 / SLC5A3 / solute carrier family 5 member 3ENSG0000019874319
A0PJK1 / SLC5A10 / solute carrier family 5 member 10ENSG0000015402519


Protein motifs (from Interpro)
Interpro ID Name
 IPR001734  Sodium/solute symporter
 IPR018212  Sodium/solute symporter, conserved site
 IPR035689  Sodium/iodide cotransporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006590 thyroid hormone generation TAS
 biological_processGO:0006811 ion transport TAS
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0015705 iodide transport IMP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071320 cellular response to cAMP IEP
 biological_processGO:0071371 cellular response to gonadotropin stimulus IEP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1903561 extracellular vesicle HDA
 molecular_functionGO:0008507 sodium:iodide symporter activity TAS
 molecular_functionGO:0015111 iodide transmembrane transporter activity IMP
 molecular_functionGO:0015293 symporter activity IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Thyroxine biosynthesis
Organic anion transporters
Defective SLC5A5 causes thyroid dyshormonogenesis 1 (TDH1)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000821 Hypothyroidism 
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 HP:0000853 Goiter "An enlargement of the thyroid gland." [HPO:curators]
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0000958 Dry skin 
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001510 Growth retardation 
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0002019 Constipation 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0100786 Hypersomnia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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