ENSG00000106028


Homo sapiens

Features
Gene ID: ENSG00000106028
  
Biological name :SSBP1
  
Synonyms : Q04837 / single stranded DNA binding protein 1 / SSBP1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q34
Gene start: 141738321
Gene end: 141787922
  
Corresponding Affymetrix probe sets: 1562442_a_at (Human Genome U133 Plus 2.0 Array)   202591_s_at (Human Genome U133 Plus 2.0 Array)   214060_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419541
Ensembl peptide - ENSP00000419388
Ensembl peptide - ENSP00000419579
Ensembl peptide - ENSP00000480488
Ensembl peptide - ENSP00000420485
Ensembl peptide - ENSP00000419665
Ensembl peptide - ENSP00000265304
Ensembl peptide - ENSP00000418068
Ensembl peptide - ENSP00000418181
NCBI entrez gene - 6742     See in Manteia.
OMIM - 600439
RefSeq - XM_005250051
RefSeq - NM_001256510
RefSeq - NM_001256511
RefSeq - NM_001256512
RefSeq - NM_001256513
RefSeq - NM_003143
RefSeq - XM_005250048
RefSeq - XM_005250049
RefSeq - XM_005250050
RefSeq Peptide - NP_001243439
RefSeq Peptide - NP_001243440
RefSeq Peptide - NP_001243441
RefSeq Peptide - NP_001243442
RefSeq Peptide - NP_003134
swissprot - A4D1U3
swissprot - Q04837
swissprot - E7EUY5
swissprot - C9K0U8
swissprot - C9J8J0
Ensembl - ENSG00000106028
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ssbp1ENSDARG00000039350Danio rerio
 SSBP1ENSGALG00000012876Gallus gallus
 Ssbp1ENSMUSG00000029911Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000424  Primosome PriB/single-strand DNA-binding
 IPR011344  Single-stranded DNA-binding protein
 IPR012340  Nucleic acid-binding, OB-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0007005 mitochondrion organization TAS
 biological_processGO:0051096 positive regulation of helicase activity IDA
 biological_processGO:0070584 mitochondrion morphogenesis IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0042645 mitochondrial nucleoid IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0003697 single-stranded DNA binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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