ENSMUSG00000029911


Mus musculus

Features
Gene ID: ENSMUSG00000029911
  
Biological name :Ssbp1
  
Synonyms : Q9CYR0 / single-stranded DNA binding protein 1 / Ssbp1
  
Possible biological names infered from orthology : Q04837
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: B1
Gene start: 40471352
Gene end: 40484700
  
Corresponding Affymetrix probe sets: 10375125 (MoGene1.0st)   10537494 (MoGene1.0st)   1427965_at (Mouse Genome 430 2.0 Array)   1430294_at (Mouse Genome 430 2.0 Array)   1444053_at (Mouse Genome 430 2.0 Array)   1452616_s_at (Mouse Genome 430 2.0 Array)   1452617_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000110427
Ensembl peptide - ENSMUSP00000113815
Ensembl peptide - ENSMUSP00000114082
Ensembl peptide - ENSMUSP00000031971
Ensembl peptide - ENSMUSP00000113563
NCBI entrez gene - 381760     See in Manteia.
MGI - MGI:1920040
RefSeq - XM_017321664
RefSeq - NM_001286663
RefSeq - NM_001286664
RefSeq - NM_028358
RefSeq - NM_212468
RefSeq - XM_006506329
RefSeq - XM_006506330
RefSeq Peptide - NP_997633
RefSeq Peptide - NP_001273592
RefSeq Peptide - NP_001273593
RefSeq Peptide - NP_082634
swissprot - Q9CYR0
swissprot - Q8R2K3
swissprot - D3Z3Y3
Ensembl - ENSMUSG00000029911
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ssbp1ENSDARG00000039350Danio rerio
 SSBP1ENSGALG00000012876Gallus gallus
 SSBP1ENSG00000106028Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000424  Primosome PriB/single-strand DNA-binding
 IPR011344  Single-stranded DNA-binding protein
 IPR012340  Nucleic acid-binding, OB-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0051096 positive regulation of helicase activity IEA
 biological_processGO:0070584 mitochondrion morphogenesis IMP
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0042645 mitochondrial nucleoid ISS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1ltm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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