ENSG00000106948


Homo sapiens

Features
Gene ID: ENSG00000106948
  
Biological name :AKNA
  
Synonyms : AKNA / AT-hook transcription factor / Q7Z591
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q32
Gene start: 114334156
Gene end: 114394405
  
Corresponding Affymetrix probe sets: 1558565_at (Human Genome U133 Plus 2.0 Array)   225701_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000363201
Ensembl peptide - ENSP00000223791
Ensembl peptide - ENSP00000303769
Ensembl peptide - ENSP00000363188
Ensembl peptide - ENSP00000363192
Ensembl peptide - ENSP00000309222
NCBI entrez gene - 80709     See in Manteia.
OMIM - 605729
RefSeq - XM_017015172
RefSeq - NM_001317950
RefSeq - NM_001317952
RefSeq - NM_030767
RefSeq - XM_011519063
RefSeq - XM_011519064
RefSeq - XM_011519065
RefSeq - XM_011519066
RefSeq - XM_005252244
RefSeq - XM_005252245
RefSeq - XM_005252247
RefSeq - XM_005252248
RefSeq - XM_006717294
RefSeq - XM_006717295
RefSeq Peptide - NP_001304881
RefSeq Peptide - NP_110394
RefSeq Peptide - NP_001304879
swissprot - Q7Z591
Ensembl - ENSG00000106948
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aknaENSDARG00000087110Danio rerio
 ENSGALG00000037031Gallus gallus
 AknaENSMUSG00000039158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022150  Transcription factor, AT-hook-containing


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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