ENSG00000107614


Homo sapiens

Features
Gene ID: ENSG00000107614
  
Biological name :TRDMT1
  
Synonyms : O14717 / TRDMT1 / tRNA aspartic acid methyltransferase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: p13
Gene start: 17142254
Gene end: 17202054
  
Corresponding Affymetrix probe sets: 206308_at (Human Genome U133 Plus 2.0 Array)   232121_at (Human Genome U133 Plus 2.0 Array)   243504_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000389497
Ensembl peptide - ENSP00000367030
Ensembl peptide - ENSP00000390611
Ensembl peptide - ENSP00000431476
Ensembl peptide - ENSP00000419625
Ensembl peptide - ENSP00000417594
Ensembl peptide - ENSP00000324263
Ensembl peptide - ENSP00000346652
NCBI entrez gene - 1787     See in Manteia.
OMIM - 602478
RefSeq - XM_017015810
RefSeq - XM_011519344
RefSeq - XM_011519345
RefSeq - XM_017015800
RefSeq - XM_017015801
RefSeq - XM_017015802
RefSeq - XM_017015803
RefSeq - XM_017015804
RefSeq - XM_017015805
RefSeq - XM_017015806
RefSeq - XM_017015807
RefSeq - XM_017015808
RefSeq - XM_017015809
RefSeq - NM_001321006
RefSeq - NM_001321007
RefSeq - NM_004412
RefSeq - XM_005252372
RefSeq - XM_005252374
RefSeq - XM_005252375
RefSeq - XM_005252378
RefSeq - XM_006717388
RefSeq - XM_011519343
RefSeq Peptide - NP_001307936
RefSeq Peptide - NP_004403
RefSeq Peptide - NP_001307935
swissprot - H0Y2T8
swissprot - H0Y4A2
swissprot - Q6ICS7
swissprot - Q7Z3E4
swissprot - A0A0B4J214
swissprot - B7Z8H2
swissprot - O14717
swissprot - A0A0U1SZ86
swissprot - A0A0C4DG18
Ensembl - ENSG00000107614
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trdmt1ENSDARG00000034518Danio rerio
 TRDMT1ENSGALG00000008686Gallus gallus
 O55055ENSMUSG00000026723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001525  C-5 cytosine methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR031303  DNA methylase, C-5 cytosine-specific, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001975 response to amphetamine IEA
 biological_processGO:0006400 tRNA modification TAS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IDA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity IDA
 molecular_functionGO:0016428 tRNA (cytosine-5-)-methyltransferase activity EXP
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
tRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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