ENSG00000107798


Homo sapiens

Features
Gene ID: ENSG00000107798
  
Biological name :LIPA
  
Synonyms : LIPA / lipase A, lysosomal acid type / P38571
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q23.31
Gene start: 89213569
Gene end: 89414557
  
Corresponding Affymetrix probe sets: 1561557_at (Human Genome U133 Plus 2.0 Array)   201847_at (Human Genome U133 Plus 2.0 Array)   236156_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000282673
Ensembl peptide - ENSP00000360903
Ensembl peptide - ENSP00000388415
Ensembl peptide - ENSP00000413019
Ensembl peptide - ENSP00000337354
NCBI entrez gene - 3988     See in Manteia.
OMIM - 613497
RefSeq - NM_000235
RefSeq - NM_001127605
RefSeq - NM_001288979
RefSeq Peptide - NP_001275908
RefSeq Peptide - NP_000226
RefSeq Peptide - NP_001121077
swissprot - Q5T770
swissprot - P38571
swissprot - A0A0A0MT32
swissprot - Q5T073
Ensembl - ENSG00000107798
  
Related genetic diseases (OMIM): 278000 - Cholesteryl ester storage disease, 278000
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lipfENSDARG00000018529Danio rerio
 LIPAENSGALG00000006378Gallus gallus
 LipaENSMUSG00000024781Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LIPM / Q5VYY2 / lipase family member MENSG0000017323961
LIPF / P07098 / lipase F, gastric typeENSG0000018233357
LIPK / Q5VXJ0 / lipase family member KENSG0000020402156
LIPN / Q5VXI9 / lipase family member NENSG0000020402053
LIPJ / Q5W064 / lipase family member JENSG0000020402249


Protein motifs (from Interpro)
Interpro ID Name
 IPR000073  Alpha/beta hydrolase fold-1
 IPR006693  Partial AB-hydrolase lipase domain
 IPR025483  Lipase, eukaryotic
 IPR029058  Alpha/Beta hydrolase fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0001816 cytokine production IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0034383 low-density lipoprotein particle clearance TAS
 biological_processGO:0048771 tissue remodeling IEA
 biological_processGO:0048873 homeostasis of number of cells within a tissue IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005764 lysosome TAS
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004771 sterol esterase activity TAS
 molecular_functionGO:0016298 lipase activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA


Pathways (from Reactome)
Pathway description
LDL clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000846 Adrenal insufficiency 
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001394 Cirrhosis 
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 HP:0001395 Hepatic fibrosis 
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 HP:0001397 Hepatic steatosis 
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 HP:0001399 Hepatic failure 
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 HP:0001433 Hepatosplenomegaly 
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0001522 Death in infancy 
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 HP:0001538 Protuberant abdomen "A thrusting or bulging out of the abdomen." [HPO:curators]
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 HP:0001541 Ascites 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001903 Anemia 
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 HP:0001922 Vacuolated lymphocytes 
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 HP:0001945 Fever 
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 HP:0002013 Vomiting 
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 HP:0002014 Diarrhea 
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 HP:0002017 Nausea and vomiting 
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 HP:0002040 Esophageal varices 
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 HP:0002092 Pulmonary hypertension 
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 HP:0002155 Hypertriglyceridemia 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002570 Steatorrhea 
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 HP:0002634 Arteriosclerosis 
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 HP:0003124 Hypercholesterolemia 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0004326 Cachexia 
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 HP:0004333 Foam cells on bone marrow biopsy 
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 HP:0004395 Malnutrition 
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 HP:0010512 Adrenal calcification "Calcification within the adrenal glands. This condition may occur in a wide variety of pathologies, some serious and some with no obvious consequence. Adrenal hemorrhage may be detected as an incidental finding in children in radiographic studies of the abdomen. Etiologies include hemorrhage into the adrenals at or immediately after birth, neuroblastoma, ganglioneuroblastoma, cortical carcinoma, pheochromocytoma, and cysts." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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