ENSG00000108298


Homo sapiens

Features
Gene ID: ENSG00000108298
  
Biological name :RPL19
  
Synonyms : P84098 / ribosomal protein L19 / RPL19
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q12
Gene start: 39200283
Gene end: 39204727
  
Corresponding Affymetrix probe sets: 200029_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000225430
Ensembl peptide - ENSP00000462938
Ensembl peptide - ENSP00000463985
Ensembl peptide - ENSP00000464538
NCBI entrez gene - 6143     See in Manteia.
OMIM - 180466
RefSeq - XM_005257564
RefSeq - NM_000981
RefSeq - NM_001330200
RefSeq Peptide - NP_000972
RefSeq Peptide - NP_001317129
swissprot - J3KTE4
swissprot - J3QR09
swissprot - P84098
Ensembl - ENSG00000108298
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl19ENSDARG00000013307Danio rerio
 Rpl19ENSMUSG00000017404Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000196  Ribosomal protein L19/L19e
 IPR015972  Ribosomal protein L19/L19e, domain 1
 IPR015973  Ribosomal protein L19/L19e, domain 2
 IPR015974  Ribosomal protein L19/L19e, domain 3
 IPR023638  Ribosomal protein L19/L19e conserved site
 IPR033935  Ribosomal protein L19, eukaryotic
 IPR035970  Ribosomal protein L19/L19e superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0002181 cytoplasmic translation IDA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0097421 liver regeneration IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IDA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0070180 large ribosomal subunit rRNA binding IEA
 molecular_functionGO:1990932 5.8S rRNA binding IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr