ENSMUSG00000017404


Mus musculus

Features
Gene ID: ENSMUSG00000017404
  
Biological name :Rpl19
  
Synonyms : P84099 / ribosomal protein L19 / Rpl19
  
Possible biological names infered from orthology : P84098
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: D
Gene start: 98026710
Gene end: 98030492
  
Corresponding Affymetrix probe sets: 10347917 (MoGene1.0st)   10380833 (MoGene1.0st)   10417664 (MoGene1.0st)   10422852 (MoGene1.0st)   10454296 (MoGene1.0st)   10556571 (MoGene1.0st)   10570625 (MoGene1.0st)   1416219_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000017548
Ensembl peptide - ENSMUSP00000103181
NCBI entrez gene - 19921     See in Manteia.
MGI - MGI:98020
RefSeq - XM_006532610
RefSeq - NM_001159483
RefSeq - NM_009078
RefSeq Peptide - NP_001152955
RefSeq Peptide - NP_033104
swissprot - P84099
swissprot - Q5I0T8
swissprot - A2A547
Ensembl - ENSMUSG00000017404
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl19ENSDARG00000013307Danio rerio
 RPL19ENSG00000108298Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000196  Ribosomal protein L19/L19e
 IPR015972  Ribosomal protein L19/L19e, domain 1
 IPR015973  Ribosomal protein L19/L19e, domain 2
 IPR015974  Ribosomal protein L19/L19e, domain 3
 IPR023638  Ribosomal protein L19/L19e conserved site
 IPR033935  Ribosomal protein L19, eukaryotic
 IPR035970  Ribosomal protein L19/L19e superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation IC
 biological_processGO:0097421 liver regeneration IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IDA
 molecular_functionGO:0070180 large ribosomal subunit rRNA binding IEA
 molecular_functionGO:1990932 5.8S rRNA binding IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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