ENSG00000110888


Homo sapiens

Features
Gene ID: ENSG00000110888
  
Biological name :CAPRIN2
  
Synonyms : CAPRIN2 / caprin family member 2 / Q6IMN6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p11.21
Gene start: 30709552
Gene end: 30754951
  
Corresponding Affymetrix probe sets: 1555608_at (Human Genome U133 Plus 2.0 Array)   218456_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449139
Ensembl peptide - ENSP00000443353
Ensembl peptide - ENSP00000444137
Ensembl peptide - ENSP00000298892
Ensembl peptide - ENSP00000379150
Ensembl peptide - ENSP00000391479
Ensembl peptide - ENSP00000403876
Ensembl peptide - ENSP00000415407
Ensembl peptide - ENSP00000438010
Ensembl peptide - ENSP00000440785
Ensembl peptide - ENSP00000441005
Ensembl peptide - ENSP00000442295
Ensembl peptide - ENSP00000443145
NCBI entrez gene - 65981     See in Manteia.
OMIM - 610375
RefSeq - XM_017019883
RefSeq - XM_017019864
RefSeq - XM_017019865
RefSeq - XM_017019866
RefSeq - XM_017019867
RefSeq - XM_017019868
RefSeq - XM_017019869
RefSeq - XM_017019870
RefSeq - XM_017019871
RefSeq - XM_017019872
RefSeq - XM_017019873
RefSeq - XM_017019874
RefSeq - XM_017019875
RefSeq - XM_017019876
RefSeq - XM_017019877
RefSeq - XM_017019878
RefSeq - XM_017019879
RefSeq - XM_017019880
RefSeq - XM_017019881
RefSeq - XM_017019882
RefSeq - NM_001002259
RefSeq - NM_001206856
RefSeq - NM_001319842
RefSeq - NM_001319843
RefSeq - NM_001319844
RefSeq - NM_001319845
RefSeq - NM_001319846
RefSeq - NM_023925
RefSeq - NM_032156
RefSeq - XM_006719138
RefSeq - XM_006719139
RefSeq - XM_006719140
RefSeq - XM_006719142
RefSeq - XM_006719144
RefSeq - XM_006719145
RefSeq - XM_006719146
RefSeq - XM_006719147
RefSeq - XM_017019851
RefSeq - XM_017019852
RefSeq - XM_017019853
RefSeq - XM_017019854
RefSeq - XM_017019855
RefSeq - XM_017019856
RefSeq - XM_017019857
RefSeq - XM_017019858
RefSeq - XM_017019859
RefSeq - XM_017019860
RefSeq - XM_017019861
RefSeq - XM_017019862
RefSeq - XM_017019863
RefSeq Peptide - NP_001193785
RefSeq Peptide - NP_001306771
RefSeq Peptide - NP_001306772
RefSeq Peptide - NP_001306773
RefSeq Peptide - NP_001306774
RefSeq Peptide - NP_001306775
RefSeq Peptide - NP_076414
RefSeq Peptide - NP_115532
RefSeq Peptide - NP_001002259
swissprot - Q6IMN6
swissprot - F5GXI7
swissprot - F5GZX3
swissprot - F5H142
swissprot - F5H5J8
swissprot - F5H7T6
swissprot - H0YGG3
swissprot - H0YID4
swissprot - H3BM22
swissprot - F5GYA1
Ensembl - ENSG00000110888
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q05A80ENSMUSG00000030309Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q14444 / CAPRIN1 / cell cycle associated protein 1ENSG0000013538723
CBLN2 / Q8IUK8 / cerebellin 2 precursorENSG000001416687
Q9BXJ4 / C1QTNF3 / C1q and TNF related 3ENSG000000821967
C1QTNF3-AMACR / C1QTNF3-AMACR readthrough (NMD candidate)ENSG000002732946
CBLN1 / P23435 / cerebellin 1 precursorENSG000001029246
C1QL3 / Q5VWW1 / complement C1q like 3ENSG000001659856
C1QL1 / O75973 / complement C1q like 1ENSG000001310946
C1QL2 / Q7Z5L3 / complement C1q like 2ENSG000001441196
CBLN3 / Q6UW01 / cerebellin 3 precursorENSG000001398996
C1QL4 / Q86Z23 / complement C1q like 4ENSG000001868975
CBLN4 / Q9NTU7 / cerebellin 4 precursorENSG000000548035


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008983  Tumour necrosis factor-like domain superfamily
 IPR022070  Cytoplasmic activation/proliferation-associated protein-1 C term
 IPR028816  Caprin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030308 negative regulation of cell growth IDA
 biological_processGO:0032092 positive regulation of protein binding IDA
 biological_processGO:0033138 positive regulation of peptidyl-serine phosphorylation IDA
 biological_processGO:0040008 regulation of growth IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0050775 positive regulation of dendrite morphogenesis ISS
 biological_processGO:0061003 positive regulation of dendritic spine morphogenesis ISS
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043235 receptor complex IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005102 signaling receptor binding IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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