ENSG00000135387


Homo sapiens

Features
Gene ID: ENSG00000135387
  
Biological name :CAPRIN1
  
Synonyms : CAPRIN1 / cell cycle associated protein 1 / Q14444
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p13
Gene start: 34051683
Gene end: 34101156
  
Corresponding Affymetrix probe sets: 200722_s_at (Human Genome U133 Plus 2.0 Array)   200723_s_at (Human Genome U133 Plus 2.0 Array)   225340_s_at (Human Genome U133 Plus 2.0 Array)   226285_at (Human Genome U133 Plus 2.0 Array)   226289_at (Human Genome U133 Plus 2.0 Array)   226990_at (Human Genome U133 Plus 2.0 Array)   236850_at (Human Genome U133 Plus 2.0 Array)   243370_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000431581
Ensembl peptide - ENSP00000434204
Ensembl peptide - ENSP00000434150
Ensembl peptide - ENSP00000340329
Ensembl peptide - ENSP00000374296
Ensembl peptide - ENSP00000431373
NCBI entrez gene - 4076     See in Manteia.
OMIM - 601178
RefSeq - XM_017017749
RefSeq - NM_005898
RefSeq - NM_203364
RefSeq Peptide - NP_005889
RefSeq Peptide - NP_976240
swissprot - E9PLA9
swissprot - G3V153
swissprot - Q14444
Ensembl - ENSG00000135387
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 caprin1aENSDARG00000009346Danio rerio
 caprin1bENSDARG00000054272Danio rerio
 CAPRIN1ENSGALG00000013532Gallus gallus
 Q60865ENSMUSG00000027184Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6IMN6 / CAPRIN2 / caprin family member 2ENSG0000011088835
C1QL3 / Q5VWW1 / complement C1q like 3ENSG000001659855
Q9BXJ4 / C1QTNF3 / C1q and TNF related 3ENSG000000821965
C1QL2 / Q7Z5L3 / complement C1q like 2ENSG000001441195
C1QL1 / O75973 / complement C1q like 1ENSG000001310945
C1QL4 / Q86Z23 / complement C1q like 4ENSG000001868974
CBLN2 / Q8IUK8 / cerebellin 2 precursorENSG000001416684
CBLN3 / Q6UW01 / cerebellin 3 precursorENSG000001398993
CBLN1 / P23435 / cerebellin 1 precursorENSG000001029243
C1QTNF3-AMACR / C1QTNF3-AMACR readthrough (NMD candidate)ENSG000002732943
CBLN4 / Q9NTU7 / cerebellin 4 precursorENSG000000548033


Protein motifs (from Interpro)
Interpro ID Name
 IPR022070  Cytoplasmic activation/proliferation-associated protein-1 C term
 IPR028816  Caprin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017148 negative regulation of translation ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0050775 positive regulation of dendrite morphogenesis ISS
 biological_processGO:0061003 positive regulation of dendritic spine morphogenesis ISS
 cellular_componentGO:0000932 P-body ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0010494 cytoplasmic stress granule ISS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003723 RNA binding ISS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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