ENSDARG00000054272


Danio rerio

Features
Gene ID: ENSDARG00000054272
  
Biological name :caprin1b
  
Synonyms : caprin1b / cell cycle associated protein 1b
  
Possible biological names infered from orthology : CAPRIN1 / cell cycle associated protein 1 / Q14444 / Q60865
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 38246940
Gene end: 38271298
  
Corresponding Affymetrix probe sets: Dr.941.1.S1_at (Zebrafish Array)   NM_213068_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000089659
Ensembl peptide - ENSDARP00000149522
Ensembl peptide - ENSDARP00000118518
Ensembl peptide - ENSDARP00000118113
NCBI entrez gene - 406341     See in Manteia.
RefSeq - XM_021467626
RefSeq - XM_021467627
RefSeq - NM_213068
RefSeq Peptide - NP_998233
swissprot - A5WVQ3
swissprot - A5WVQ2
swissprot - A5WVQ1
ZFIN ID - ZDB-GENE-040426-2020
Ensembl - ENSDARG00000054272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAPRIN1ENSGALG00000013532Gallus gallus
 Q14444ENSG00000135387Homo sapiens
 Q60865ENSMUSG00000027184Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
caprin1a / cell cycle associated protein 1a / Q14444* / Q60865* / CAPRIN1* / cell cycle associated protein 1*ENSDARG0000000934661
Q5RJ80 / caprin2 / caprin family member 2ENSDARG0000002074924
c1ql3b / complement component 1, q subcomponent-like 3b / C1QL1* / O75973* / O88992* / C1q-related factor * / complement C1q like 1*ENSDARG000000285216
c1ql3a / complement component 1, q subcomponent-like 3a / C1QL3* / Q5VWW1* / complement C1q like 3*ENSDARG000000103505
c1ql4a / complement component 1, q subcomponent-like 4 / C1QL4* / Q4ZJM9* / Q86Z23* / complement C1q like 4* / Complement C1q-like protein 4 *ENSDARG000000115495
c1ql4b / complement component 1, q subcomponent-like 4b / C1QL4* / Q4ZJM9* / Q86Z23* / complement C1q like 4* / Complement C1q-like protein 4 *ENSDARG000000553174
si:dkey-5n18.1ENSDARG000000434364
c1ql2 / complement component 1, q subcomponent-like 2 / Q7Z5L3* / Q8CFR0* / complement C1q like 2* / Complement C1q-like protein 2 *ENSDARG000000155924
c1ql3b / complement component 1, q subcomponent-like 3b / C1QL3* / Q5VWW1* / Q9ESN4* / complement C1q like 3* / Complement C1q-like protein 3 *ENSDARG000000364834
cbln2b / cerebellin 2b precursor / CBLN2* / Q8IUK8* / Q8BGU2* / Cerebellin-2 * / cerebellin 2 precursor*ENSDARG000000771513
cbln2a / cerebellin 2a precursor / CBLN2* / Q8IUK8* / Q8BGU2* / Cerebellin-2 * / cerebellin 2 precursor*ENSDARG000000746013
cbln12 / cerebellin 12ENSDARG000000682323
cbln4 / cerebellin 4 precursor / Q8BME9* / Q9NTU7* / Cerebellin-4 *ENSDARG000000612403
si:dkeyp-74b6.2ENSDARG000001150702
cbln1 / cerebellin 1 precursor / P23435* / Q9R171* / Cerebellin-1 Cerebellin [des-Ser1]-cerebellin*ENSDARG000000572962


Protein motifs (from Interpro)
Interpro ID Name
 IPR022070  Cytoplasmic activation/proliferation-associated protein-1 C term
 IPR028816  Caprin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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